KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0157100-01
Entry
Os05t0157100-01   CDS       T02163                                 
Symbol
Os05g0157100
Name
(RAP-DB) Nucleic acid-binding, OB-fold domain containing protein.
  KO
K16253  DNA-directed RNA polymerase IV and V subunit 7
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Os05t0157100-01 (Os05g0157100)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os05t0157100-01 (Os05g0157100)
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     Os05t0157100-01 (Os05g0157100)
SSDB
Motif
Pfam: SHS2_Rpb7-N RNA_pol_Rbc25 S1_2
Other DBs
RAP-DB: Os05t0157100-01
LinkDB
Position
chr05:3343800..3344327
AA seq 175 aa
MVFLKVEMSLNVLISPSQLSPQGLLLRKAVIVRLLEDIANRKASKDHGYYIAVSELKAIS
EGKVRELTGDVLFPVTFTCITQKPMKGEVLVGSVDKILKHGIFLKSGPIESIFLSEKTMS
DFKYIGGENAVFMNEHSKLEKDTVVRFKVMGFRWMEADRQFQLLATLAGDYLGPL
NT seq 528 nt   +upstreamnt  +downstreamnt
atggttttccttaaggtggagatgtctttgaatgtgttgatctcacctagccagctgagc
ccccagggtctcttgctccgcaaggctgtcattgtccgccttctggaggatatagcaaac
cggaaggcctccaaggatcatggttactacattgctgtgagtgagctgaaggcgatatca
gaagggaaagtgcgtgagctgaccggagacgttcttttcccggtgacgttcacctgcatc
acgcagaagcctatgaagggcgaggtcttagttggctccgtggacaagatcctcaagcat
ggcattttcctcaaatctggaccgatagaaagcatctttctgtcggagaagacgatgagc
gacttcaagtacattggtggggagaacgcggtgttcatgaatgaacactcgaagctggag
aaggacaccgtcgtgcgcttcaaggtcatggggttccgctggatggaagccgatcgccag
ttccagctccttgctaccctggctggtgactatcttggaccactatga

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