Oryza sativa japonica (Japanese rice) (RAPDB): Os09t0543400-00
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Entry
Os09t0543400-00 CDS
T02163
Symbol
Os09g0543400
Name
(RAP-DB) Ornithine decarboxylase (EC 4.1.1.17).
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00330
Arginine and proline metabolism
dosa00480
Glutathione metabolism
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
dosa04148
Efferocytosis
Module
dosa_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Os09t0543400-00 (Os09g0543400)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Os09t0543400-00 (Os09g0543400)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Os09t0543400-00 (Os09g0543400)
Enzymes [BR:
dosa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Os09t0543400-00 (Os09g0543400)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
RAP-DB:
Os09t0543400-00
LinkDB
All DBs
Position
chr09:complement(21409271..21410557)
AA seq
428 aa
AA seq
DB search
MCNVCFTVTYHVSTMVGGSPMQAVLMAPGVKDKKVLAFKRGKGKDADAGVTALIRDIVAG
GARSAFHVFDLAKVVDLHRGWRRALPDVRPCYAVKCNPDGAMLAALAALGAGFDCASRAE
IEAVLALGVRPATIVYANPCKPEAHLEYAAEVGVNLTTYDSEEEVAKVRRCHPRCELLLR
IKAPDSGDAKVDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASRADVYRGAIE
AAREAFDAAAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPG
RYFAETAFTLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDT
TAATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI
KIHLAYSS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaatgtttgttttacagtaacctatcacgtaagtaccatggttggaggaagcccc
atgcaggccgtgctcatggcccccggcgtcaaggacaagaaggtgctcgccttcaagcgc
ggcaagggcaaggacgccgacgccggcgtcacggcgctcatccgcgacatcgtcgccggc
ggcgcccggagcgcgttccacgtcttcgacctcgccaaggtcgtcgacctccaccgcggg
tggcgccgcgcgctccccgacgtgcgcccctgctacgccgtcaagtgcaaccccgacggc
gccatgctcgccgcgctcgccgcgctcggcgccggcttcgactgcgccagccgcgccgag
atcgaggcagtgctcgcgctcggcgtccgccccgccaccatcgtctacgccaacccgtgc
aagcccgaggcgcacctcgagtacgccgccgaggtcggcgtcaacctcaccacctacgac
tccgaggaggaggtggccaaggtccggcgatgccacccgcgctgcgagctgctgctccgc
atcaaggcgcccgactccggcgacgccaaggtcgacctggggctcaagtacggcgccaac
ccggacgaggtgctaccgctcctccgcgccgcgcagcgcgagggcgtcgccgtcgccggc
gtctccttccacgtcgggagcggcgcgtcccgcgccgacgtctaccgcggcgccatcgag
gcggcgcgcgaggcgttcgacgccgcggcggcgctcggcatgccgccgatgcgcgtcctc
gacatcggcggcggcttcatggccggccggaccttcgacgaggcggcggcggtcatcaac
cgcgcgctggagcgccacttcggcgacctcccctgcgtcgaggtgatcggcgagcccggg
cggtacttcgccgagacggcgttcaccctcgccgcgcgcgtcatcgggaagcgcacccgc
ggcgagctccgggagtactggatcgacgacggcctctacggctccctcaactgcatcctc
atggaccactacgtgccgcgcccgaggccgctcgccgccgccgccgccggcgaggacacg
acggcggcgacgacgcacgcctcgacggtgttcggcccgacgtgcgactccctcgacacg
gtggtcaccggctaccagctgccggagatgagcgtcggcgactggctcgtgttcgacgac
atgggcgcctacaccaccgcggctggctccaacttcaacggcttcgccacgtcagcgata
aagatccacctggcatactccagctag
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