Oryza sativa japonica (Japanese rice) (RAPDB): Os10t0189600-01
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Entry
Os10t0189600-01 CDS
T02163
Symbol
Os10g0189600
Name
(RAP-DB) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein.
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00600
Sphingolipid metabolism
dosa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Os10t0189600-01 (Os10g0189600)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dosa01007
]
Os10t0189600-01 (Os10g0189600)
Enzymes [BR:
dosa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
Os10t0189600-01 (Os10g0189600)
Amino acid related enzymes [BR:
dosa01007
]
Aminotransferase (transaminase)
Class II
Os10t0189600-01 (Os10g0189600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
AF2212-like
Motif
Other DBs
RAP-DB:
Os10t0189600-01
LinkDB
All DBs
Position
chr10:complement(join(6213295..6213409,6213106..6213200,6212891..6212982,6212424..6212517,6212277..6212349,6212063..6212195,6211446..6211620,6210483..6210623,6210195..6210290,6209957..6210098,6209563..6209690,6209311..6209475))
AA seq
482 aa
AA seq
DB search
MMEMVLPVANATAAALARVSAVFNAPLARAVVFGIHIDGHLVVEGLLIAAILFQLSRKSY
KPPKKPLTEREVDELCDDWQPEPLCPPIKEGARIDTPTLESAAGPHTTVDGKEVVNFASA
NYLGLIGNEKIIDSCVGSVEKYGVGSCGPRSFYGTIDVHLDCESKIANFLGTQDSILYSY
GISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFKHNDMASLASILEKLTH
GNKHTEKIRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGKSGRGLA
EHYGVPVEKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSSGYVFSASLPPYLASAAM
SAVNHLEENPSVLANLRSNIALLHKELSDIPGLEIASNILSPIVFLKLKTPTGSAVADLE
LLEIIAEKVLMEDSVFIAATKRSSLDKCRLPVGIRLFVSAGHTESDIFKVSASLKRVAAS
VV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaatggtattgccagtcgcgaatgctacggctgcggcacttgcacgggtttct
gctgtgttcaatgccccacttgcccgtgctgttgtctttgggattcatattgatggacat
ttggttgtggaagggcttctcattgctgccatactgtttcagctctccaggaagagctac
aaacctccaaagaagccactcactgagagggaggttgatgagctctgtgatgactggcaa
ccggagcctctatgcccacccatcaaggaaggagcacggatcgacacgcctacattagaa
agtgctgctggacctcatacaactgttgatggaaaagaagttgtaaactttgcatcagca
aactaccttggtttgattggcaatgaaaagataattgattcctgtgttggctcagtggag
aaatatggtgttggatcatgtggaccacgaagcttttatggaactattgatgtgcacctt
gactgcgagagtaaaatagcaaatttcctgggaacccaagattcaatcttgtactcctat
gggatatcaaccatcttcagtgtaattcctgccttttgcaagaagggagatatcattgta
gctgatgagggtgttcactgggctgtgcaaaatggtttacagctttcaagaagcactgtt
gtatatttcaagcataatgacatggcttcacttgcgagcattttggaaaaactaactcat
ggaaacaaacatacagaaaagattaggcgctatattgttgtggaagctatttaccagaat
tctggccaaattgctcccttggatgagatagttcggttgaaggagaaataccggtttcgt
gttatattggaggagagccattcttttggtgttcttggcaagtctggacgtggccttgct
gaacactatggagttcctgtggaaaaaatagacattattactgctggaatgggaaatgcg
ttagctaccgatggtggtttttgtacaggaagtgtcagagttgttgatcatcagcgtcta
agcagctctggttatgttttttctgcctcgttgccaccataccttgctagtgcagcaatg
tctgctgtgaaccacctggaggagaacccatcagttctcgccaatctaagatcaaacatc
gcccttctgcataaagagttgtcagatatacccgggctcgaaattgctagcaatatcttg
tcacctattgtctttctcaaattgaagacaccaaccggttctgctgttgctgacctggaa
ctccttgagattattgcagagaaggtcttgatggaagattcagtcttcattgcagcaaca
aagaggtcgagtttggacaagtgtcggctcccggttggaatccgcttattcgtgtcagct
ggtcacactgaatctgacatcttcaaagtatctgcatccctgaagagggttgcagcatca
gttgtctag
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