Desulfosarcina ovata subsp. sediminis: DSCO28_00220
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Entry
DSCO28_00220 CDS
T06286
Name
(GenBank) glycyl radical enzyme
KO
K07540
benzylsuccinate synthase [EC:
4.1.99.11
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00623
Toluene degradation
dov01100
Metabolic pathways
dov01120
Microbial metabolism in diverse environments
dov01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00623 Toluene degradation
DSCO28_00220
Enzymes [BR:
dov01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.11 benzylsuccinate synthase
DSCO28_00220
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Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
BBO79456
UniProt:
A0A5K7ZEU1
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Position
complement(22334..24922)
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AA seq
862 aa
AA seq
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MVTTAEAIDYKGKRVEFPLEYAAENEVPDEELHEHLAKPSTERTKRLKARCRWKHASAGE
FVEKGVRAGIERMRLLTEAHKASEGKPEVMRRALGLANILNKCTIVLQDDEFIIGYHAED
PNMFPLYPELAYMAVADYLITDYAPQPVEEAREIMEYWVPYSMQSKCEHYFDPEDLQRMY
QVSTMEAPGFATGYNSIVPPYETVLEDGLLKRIELAEANIKMAKEKMAEVPWDATKALKW
LDKIDNWEAMIVVDKAVIAWARRHARLCKIVAENFETNPKRVEELLEIADISQRVPAEPC
KGLKDAFQAKWYTYLLCHAIDRYASGMAHKEDTLLWPYYQNSVIDKSFQPMTHADVVEMV
EMERLKVSEHGAGKSRAYREIFPGSNDLFIISLGGTLSDGSDACNDMTDAILEATRNIRT
TEPSLMFRYSKKGRTKTKELVFGCIRDGLGYPSIKHDEIGVQQMKEYSKFSTEGKGATDE
EAHNWVNVLCMSPGIHGRRKTQKTRSEGGGSIFPAKIMEVTLNDGYDWSYADMQLGPHTG
HAEDFNTFEELWEAFKVQYQYAASLVIRCKDTLRYYEGKFLQMPFVSSIDDGCMELGRDA
CELSEQPNGWHNPITTIVAANSLVAIKKLIYDEKKYTMKQLMDALKANWDGFEEMRKDFK
NAPKWGNDDEYADATIKDFYEDIIGGEMRKITNYSGGPVLPVGQAVGLYMEIGSRTGPTP
DGRYGGEAADDGGISPYMGTDTKGPTAVLRSVSRVQKNQKANLLNQRLSLPIMRSQHGFN
VWHAYMDTWHDLNIDHVQFNVVSTAEMKAAQKEPEKHQDLIVRVAGFSARFVDIPTYGQN
TIIARNEQEFGAEDYEFIDADL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaactgcggaagcgattgattataaaggtaagagagtggagtttcccttggaa
tatgctgcagaaaatgaggttccagatgaggaactgcacgagcacctggccaagccgtcc
acggaaagaaccaaaagactgaaggcccgctgcaggtggaaacatgcttcggcgggggag
tttgtggaaaagggggttcgcgccggaatcgagcgaatgcggttgctgaccgaagcgcat
aaagcaagcgaggggaagccggaagtgatgcgcagggcgctggggctggccaacattctg
aacaaatgcacgattgttttacaggatgatgagtttatcatcggataccatgccgaagat
ccgaacatgtttcctctctatcccgaacttgcctatatggctgtcgccgattacctaatc
accgattacgcgcctcagccagtggaggaagccagagagataatggagtactgggtgccg
tacagcatgcagagtaaatgcgagcattactttgacccagaggatcttcaacggatgtac
caggtcagtaccatggaagccccggggttcgccaccggctataacagtatcgtaccgcct
tatgaaacggtcctcgaagacggcctgctcaaacggatcgagttggcggaagccaatatc
aaaatggccaaggaaaaaatggctgaagtcccgtgggacgcgacaaaagccctaaagtgg
ttagataagatcgataactgggaagcgatgattgtcgtggacaaggcggttatcgcatgg
gccagacgccatgccaggctgtgcaaaatcgttgctgaaaacttcgaaaccaatcccaaa
cgtgtagaggaactgctggagattgctgatatcagtcaacgggttccggccgaaccgtgc
aaagggcttaaagacgctttccaggcaaaatggtatacttatttgctttgccatgccatt
gaccgttatgcaagcggtatggcccacaaagaggatacccttttgtggccatattaccag
aatagtgtgatcgataaatccttccagcccatgacccatgcggatgtagttgagatggtc
gaaatggagcggctcaaggtctccgaacacggggccggcaaatcccgtgcttaccgggaa
atttttccgggatccaatgacctttttattatctccctcggtggtacgctttcggatggg
tccgatgcctgcaacgatatgaccgatgcgatcttggaggcaacgagaaacatccggact
acggaaccgtctcttatgttccggtattcaaaaaagggacgcacaaagaccaaggaactg
gtatttggttgtattcgagacggcctgggatatccttccatcaagcatgatgagataggc
gtccaacagatgaaggagtacagcaaattcagcaccgagggcaagggtgcgactgacgag
gaggcccacaactgggtaaatgtcctttgtatgtctcccggaattcatggaagaagaaaa
acccaaaagacccgttctgaaggcggcggttccattttcccggcaaagatcatggaggtt
acgctgaatgacggctacgactggtcatacgccgatatgcagctgggtccgcataccggc
cacgcggaggatttcaataccttcgaggaactctgggaagcgttcaaagtacagtaccag
tacgcagccagtctggtcatcaggtgcaaagacaccttgcgttattatgaaggaaaattt
ctacagatgccgttcgtttccagcatcgatgacggctgtatggaactcggccgagacgca
tgcgagctttccgaacaacccaacggctggcacaatccgattacaaccattgtagccgca
aattcattggttgccattaaaaagcttatttatgatgagaaaaagtacaccatgaagcag
ctcatggatgcgctgaaggccaattgggacggttttgaagaaatgcggaaggattttaaa
aacgctcccaagtggggaaatgacgatgagtatgccgatgcaaccattaaggatttctat
gaagacatcatcggcggtgaaatgagaaagatcaccaattattcaggaggccccgtatta
cccgtaggacaggcggtcgggctttatatggaaatcggttcacgaaccggccccaccccg
gacggacggtacgggggcgaggccgccgatgacggagggatctcaccctatatgggtacg
gacaccaagggacccaccgctgtcttgcgatcggtctccagggtgcaaaaaaatcagaag
gcaaatcttttgaaccaacgtctgtctttgcctattatgagaagtcaacatggctttaac
gtatggcatgcgtatatggatacctggcatgacctgaatatcgatcacgtgcagttcaac
gtggtcagtaccgccgaaatgaaggcggcccagaaagaacctgaaaaacatcaggatctg
atcgtccgggtggcgggcttcagcgccaggttcgtcgacatacccacctatgggcagaat
acgattatcgccagaaacgagcaggaattcggcgcggaggattacgaatttatcgacgcc
gatctgtaa
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