Desulfosarcina ovata subsp. sediminis: DSCO28_15650
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Entry
DSCO28_15650 CDS
T06286
Name
(GenBank) glycyl radical enzyme
KO
K07540
benzylsuccinate synthase [EC:
4.1.99.11
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00623
Toluene degradation
dov01100
Metabolic pathways
dov01120
Microbial metabolism in diverse environments
dov01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00623 Toluene degradation
DSCO28_15650
Enzymes [BR:
dov01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.11 benzylsuccinate synthase
DSCO28_15650
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Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
BBO80999
UniProt:
A0A5K7ZN43
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Position
complement(1695550..1698129)
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AA seq
859 aa
AA seq
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MTTVAPSVQYQGQTIDFPLENPEEMNVSDDRLTQTLASPSTERTKRLKARCRFKHTAAGE
FVNPDLKGGIERARYFTEGFKNAGGKPYILRRAESIANVLNKTTIVLQEDELIIGFNAEH
PEKFPLFPETSHLNVIDFINSPYCPEEKEEAVELVEYWEKYGLVTKGARYFSELELQQMY
QFSTMEAPAFANAYNSTVPPYETIMEDGLNKRIAMAEENIARAKAELAAADWNGPERLPL
LDKIDTWEAMIIVDQAVINWAQRHGRMCRIVAEKFESDAKRQAELMEIADICQRVPAEPC
RGLRDAMQVKWFTYLVCHAIETYASGYAHKEDKVLWPYYQVSVIDQSFQPMTHADVVELV
ECERLKVSEHGCGKNRAYRSAFAGSNDLFILTLGGTNKDGSDGCNDMTDAILQAAKNIRT
TEPSIGFRWSPKGRKKTKRLVFECIRDGLGFPSIKNDELATEQLMAQFGASEEEARDWAL
VLCMSPGHCGRRKAQKVRTEGGGGSFTAKVFEITLSDGFDWSFSGFQMGPKSGDPRDFKT
FDELWEVFRKQSDYVNDMLWRTKDVTRKLQAKYLQLPFLSSLDDGCMERGIDAVSNTELP
NPWLQVHTAIVACNSLTAIKKLVYDEKKYTMAQLIEALHANWEGYEEMRRDFAAAPKWGN
DDDYADAIVKAYWEDILAEKYKRIVTYSGAHPLAGSQAVAVYLHIGSITGPTPDGRFGGE
ACDDGGVSPMAGTDKLGPTAVLRSLSKIDSSKFKFNLLNQRLSVPLMRSKHGFDIWHAYM
KTWHDLKIDHVQFNCVSTEEMLAAQKEPEQHEDLIVRVAGYSARFVDISTYAQNTIIKRN
VQGFGPAEFDKFSVEFSEA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagtcgccccatccgttcagtaccaaggacagaccatcgattttccgctcgaa
aatcctgaagaaatgaatgtttccgacgaccgtttgacccagacgctggccagccccagt
acggaacgaaccaaacggttgaaggcgcgttgccgcttcaagcacaccgctgccggggaa
tttgtcaatcccgatttgaagggcgggatcgaaagagcaaggtattttaccgaaggattc
aagaatgccggtggcaagccgtatatcctgcgccgagccgaatccattgccaacgttctc
aataagacgacaatcgttcttcaggaagacgagttgatcatcggattcaatgccgagcac
cccgagaaatttccgctattcccggagacatctcatctgaatgtgatcgacttcattaac
agcccgtattgcccggaagagaaggaagaggccgtcgaactggtggaatactgggaaaaa
tacggccttgtgaccaagggggcacgctacttcagcgaactggagctgcagcagatgtac
cagttctcgacaatggaggcgccggcttttgcaaatgcctacaacagtaccgtgccgccg
tacgaaaccatcatggaagacgggttgaacaagcgtatcgccatggcggaagagaatatc
gcacgggcgaaagccgagttggccgctgcggactggaatggaccggaaagactgccactg
ctggacaagattgatacatgggaagcgatgatcatcgtcgatcaagcggtcatcaactgg
gcgcagcggcatggcaggatgtgccgcatcgttgccgagaaattcgagtccgatgccaag
cggcaggccgaattgatggaaattgccgatatctgccagcgcgtcccggccgagccttgc
aggggacttcgcgatgcaatgcaggtcaaatggttcacctatctggtttgccacgccatt
gaaacctacgccagcggctacgcgcataaagaggacaaggtcctgtggccgtactaccag
gtaagtgtgatcgatcaatcgtttcagcccatgacgcatgcggatgtcgtggaactggta
gaatgtgagcgtttgaaagtctccgaacacggctgcgggaagaaccgtgcgtaccgctct
gctttcgcggggtccaacgaccttttcattctaacgctcggcgggaccaataaggacggt
agcgacggttgcaatgacatgaccgacgcaattcttcaggccgccaaaaacattcgcacc
accgagccgtccattggatttcgctggagcccaaaagggcgaaaaaaaacaaagcgcctg
gttttcgagtgtattcgcgacgggctcggttttccatcgataaaaaacgacgaactggcc
accgagcagttgatggcgcaattcggcgcctcggaggaagaggctagggattgggcgttg
gtgttgtgtatgtcacccgggcactgtggtcggcgaaaggcgcagaaagtcagaaccgaa
ggcggcgggggatcattcacggcaaaagttttcgagattaccttaagcgacggctttgat
tggtccttttcgggctttcaaatggggccgaaatccggtgatccgcgggattttaaaacc
ttcgatgaactatgggaagtattccgcaaacaaagcgattacgtgaatgacatgctctgg
cgcaccaaggacgtgacccgtaagcttcaagccaagtacctgcaattgccgtttctctca
agcctcgatgacggttgcatggagcgcggcatcgatgcggtcagcaacaccgaactgccc
aatccgtggctgcaggtgcatacagcgatcgtggcctgcaactcgctgacggcgatcaaa
aaactggtctatgatgaaaagaagtacaccatggctcaactgatcgaagcactgcacgcc
aactgggagggctatgaggaaatgcgccgggatttcgctgccgcacccaagtggggcaat
gacgacgactacgctgatgccatcgtcaaggcgtattgggaggatatcctggccgaaaag
tataagcgcatcgtgacctattcgggcgcccatcctttggccggctcgcaagccgtggcc
gtttacctgcacatcggttccattaccggcccgacgcccgacggccgtttcggcggcgag
gcctgtgacgatggcggggtttcgcccatggcggggaccgacaaactcggccccacggcc
gtgctgcggagcctgtcgaaaatcgattcatccaaattcaaattcaatttgctcaatcaa
cggctgtccgtgccgttgatgcgcagcaagcacggttttgatatctggcacgcctatatg
aaaacctggcacgacctgaaaatcgaccacgtccaattcaactgtgtgagtacggaagag
atgttggccgcccaaaaggagccggagcagcacgaggatttgatcgtccgggtcgccggt
tacagtgcacggtttgtagatatctcaacctatgcccagaacaccatcatcaaacgaaac
gttcaggggtttggacccgccgagtttgacaagttcagtgttgaattcagtgaagcgtag
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