Desulfosarcina ovata subsp. sediminis: DSCO28_65240
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Entry
DSCO28_65240 CDS
T06286
Symbol
pflD_2
Name
(GenBank) dehydrogenase
KO
K07540
benzylsuccinate synthase [EC:
4.1.99.11
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00623
Toluene degradation
dov01100
Metabolic pathways
dov01120
Microbial metabolism in diverse environments
dov01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00623 Toluene degradation
DSCO28_65240 (pflD_2)
Enzymes [BR:
dov01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.11 benzylsuccinate synthase
DSCO28_65240 (pflD_2)
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GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
BBO85958
UniProt:
A0A5K8A0J5
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All DBs
Position
7489040..7491634
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AA seq
864 aa
AA seq
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MATMAPAVEYKGKVIDFPFENPEEEQIPDDELHEHLAKPSTERTKRLKARCRWKHASAGE
FVEHGVRAGIERMRLVTEAHKASRGRPEVIRRALILESCLNKSTLCLQTDEKIIGYHAED
PNYFPLYPELSYMNVKDYLMSDYSPQPEAEAEAINDYWKPYSLQAKCEQYFEPIDLQRMY
QVSTMEAPTFAHGYNSIIPPYETVLEDGLLKRIEMAEEYIKDAKAELAKEPWDGSKQLSW
IPKIDNWQAMVIADKAVISWARRYARLCKIVAENFEPDPERKKELMEMAEISQRVPAEPS
KGLKDAFQAKWYTFLVCHGIERYASGFAHKEDKVLYPYYKASVIDKTFQPMTHADAVEYV
EMERLKISEHGAGKSRGYREIFPGSNDLFILTLGGTNRDGTDGCNDMTDAILEGARNIRT
TEPSIVFRYSKKNRTETLRKVFNCVRDGLGYPSIKNDDVGIEQMKYYSKFSMNNNGATDE
EAHDWCNVLCMSPGLCGRRKSQKTRSEGGSAIFPAKILEITLNNGFDWAYTDMQLGPETG
NAEDFKTYDDLLEAFRKQYSYVMSLVVRAKDVGRHIETQFLQIPFVSSIDDGCMELGEEA
THLSEQPNGWHNPITTIVAANSLVAMKKLIYDEKKYTMKQLMEALRANWEGHEDMRKDFK
NAPKWGNDDDYADTIIQSFYEDILGGEMAKVTNYSGGPVLPVGQAVALYMEVGSRTGPTP
DGRYGGEAADDGGISPYFGTDTKGPTAVLKSVSKVQKNQKANLLNQRLAVPMMRSVHGFD
IWHAYMDTWHDLNVDHVQFNCVSTDEMRAAQREPEKHRDLIVRVAGFSARFVDIPTYGQN
TIIARNEQEFGTQDFEFMNLELGN
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatggcaccggcagtagagtataaaggaaaggtaattgatttcccgtttgaa
aacccggaagaagagcagatccccgatgatgaactccacgaacatctggccaaaccgtcg
acggagcgcacaaaacggctgaaggcccgctgccggtggaaacacgcctctgccggggag
ttcgtcgaacacggcgtacgtgcgggaatcgaacgcatgcggctggttaccgaggcccat
aaggcgtcgcgtggaagacctgaggtcatccggcgggccctgatactggagagttgcctg
aacaagagtaccctctgtttgcagaccgatgagaaaatcatcggttaccacgccgaggat
cccaattatttcccgctgtatcccgaattgtcctacatgaacgtcaaagattatctgatg
agcgattactcgccgcagccggaggccgaggcggaagccatcaacgattattggaaacca
tacagcctgcaggccaaatgcgaacagtacttcgagcccattgacctgcagcggatgtat
caggtcagcaccatggaggcgccgaccttcgcccatggatacaacagcatcattccgcct
tacgagacggttctcgaggacggcctgctcaagcgcatcgagatggccgaggaatatatc
aaggacgccaaggccgaactggccaaggaaccctgggatggcagcaaacagctcagctgg
attcccaagatagacaactggcaggcgatggtcattgccgacaaggcggtgatcagctgg
gcacgccgctacgcccggctctgcaagatcgtggcggaaaacttcgagccggatccggag
cgcaagaaagagctgatggagatggccgaaatcagtcaacgggttccggcggagcccagc
aagggactcaaggatgccttccaggcaaagtggtatacctttctcgtctgccatgggatc
gaacgctatgccagcggtttcgcccacaaggaagacaaggtgctctatccctactacaaa
gccagtgtgatcgataagaccttccagcccatgacccatgccgatgccgtcgaatacgtg
gagatggagcggctcaaaatttccgagcacggcgccggaaaatcgagaggctatcgggaa
atcttccccgggtccaacgatctttttatcctgaccctcggcggtaccaaccgggacggg
accgacggctgcaacgacatgaccgatgcgatcctcgagggggcgcgcaacatccgcacg
acggaaccgtccattgttttccgctattccaagaaaaacaggaccgagaccctgcgcaag
gtgttcaactgtgtccgcgatggtctcggttacccgtcgatcaagaatgatgacgtcggt
atcgagcagatgaaatattacagcaagttcagcatgaacaacaacggggccacggacgag
gaagcccatgactggtgcaatgtgctctgcatgtcgccgggattgtgcgggcggcgcaaa
tcccagaaaacccgctccgagggtggcagcgccattttcccggccaagatccttgagatt
accctcaacaacggctttgactgggcctatacggatatgcagctggggccggaaaccgga
aatgccgaagacttcaagacctatgacgatctgctggaggccttccgcaagcagtacagt
tacgtgatgagcctggtggtacgggccaaggacgtgggccggcacatcgaaacccagttc
ctgcagattccgttcgtttccagcatcgacgacggctgcatggagcttggcgaagaggcc
acccacctgtcggaacagcccaacgggtggcacaaccccatcacgaccatcgttgccgcc
aattctcttgtggccatgaaaaagctgatttacgatgaaaagaaatataccatgaagcag
ctcatggaagccctgagagccaactgggaaggccatgaagatatgcgcaaggattttaaa
aacgcacccaaatggggtaacgacgacgattacgccgacacgattatccagagcttctac
gaagacatcctcggtggcgagatggctaaggtgaccaactattccggcgggccggtgctt
cccgttggccaggccgtggccctgtacatggaggtgggttcccgcaccggtcccacgccg
gacggccgttacggtggcgaagcggccgatgacggcggcatttcaccctacttcggaacg
gataccaagggccccacggcggttctgaaatcggtctccaaggtccagaagaaccagaag
gccaacctgctcaaccagcgtctggcggtccccatgatgcgcagtgtccacggattcgat
atctggcatgcctatatggatacctggcacgatctcaatgtcgaccatgtgcagttcaac
tgcgtgagcacggacgagatgcgtgccgcccagcgggagccggaaaaacatcgcgacctg
atcgttcgggttgccggcttcagcgcgcgtttcgtcgatattcccacctatggccagaat
acgatcattgccagaaacgagcaggagttcggtacccaggatttcgaattcatgaatctg
gagttggggaactag
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