Devosia oryziradicis: JI749_11610
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Entry
JI749_11610 CDS
T09885
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
doy
Devosia oryziradicis
Pathway
doy00190
Oxidative phosphorylation
doy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JI749_11610
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JI749_11610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doy03019
]
JI749_11610
Enzymes [BR:
doy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JI749_11610
Messenger RNA biogenesis [BR:
doy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JI749_11610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
QQR35022
LinkDB
All DBs
Position
complement(2318243..2320411)
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AA seq
722 aa
AA seq
DB search
MNEMSEFAEADVSVPDVEALRKSPARFVNREVSWLQFNMRVLEEAGNSNHPLLERLRFVS
ISANNLDEFYMVRVAGLKGQLRAGLSKQSADGLTPAEQMEEIATLAQHLQLEQQDHWQSL
REELFAQNVVIHEADDLTQDQVNYLQKLFREEIFPVLTPIAVDPAHPFPFIPNLGLALAF
ELKRPDNDLPLTALVRIPGNLDRFINLPTGLVSEGRSEVVTIDTLVKLFFHKMFPGHEVV
GSGAFRIIRDSEIEIDDEAADLVVEFETALRQRRRGQVIRLEIESSMPRALKRQIGEQLG
VKEGDVFEVQGFLGLADARKICDIERPDLKFTPYHARFPERIRDYNGDSFAAIRAKDILV
HHPFESFDVVAQFLMQAARDPDVVAIKQTLYRTSADSPIIKALVLAAEAGKSVTCLVELK
ARFDEEANIRWARDLERAGAQVVFGFIELKTHAKLSQVVRREKGKLVSYCHIGTGNYHPI
TAKIYTDLSYFTIDPSITRDVARVFNFITGYARPTELETIAVSPVNLRQTLLDNIAAEMD
FASNGQPASILLKMNSLVDPQVIDALYDASQAGVKIDLIVRGICCLRPGIPGFSENIRVK
SVVGRFLEHSRIYCFGNGESMPNPRAKVYISSADLMGRNLDGRVEVMVPILNKTVHKQIL
DRILVAYLRDNQQSWEVLPDGSSHRVRSGEGEEPFNAHNYFMTNPSLSGRGSAGSDGEEG
LA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatgagcgagttcgccgaagccgatgtttcggtccccgatgtcgaagcgctg
cgcaagagcccggcacgcttcgtcaatcgcgaggtgagctggcttcagttcaacatgcgc
gtgctcgaggaagccggcaattcaaaccatccgctgctcgagcggctgcgttttgtttcg
atctcggccaacaacctcgacgaattctacatggtccgcgtcgcgggcctcaagggccag
ctgcgcgccgggctgtccaagcagagcgcggacggcctgacacccgccgagcagatggaa
gaaattgccacgctggcccagcacctgcaactcgaacagcaggatcattggcagagcctg
cgcgaggaactgtttgcgcagaacgtcgtgatccacgaggccgatgacctgacgcaggac
caggtgaactacctgcaaaagctgttccgcgaagaaatcttcccggtactgacgccgatc
gcggtcgatcctgcccatccgttcccgttcattcccaacctgggcctggcgctggctttt
gagctgaagcgtcccgacaatgacctgccgctcaccgccctggtgcgtattcccggcaat
ctggatcgcttcatcaacctgccgaccgggctggtgtcggagggacgcagcgaggtcgtg
accatcgatacgctggtcaagctcttcttccacaagatgtttccgggccacgaagtggtc
ggttccggggccttccgcatcatccgcgacagcgaaatcgaaatcgacgacgaagccgcc
gacctggtggtggaatttgagactgcccttcggcagcgccgccgcgggcaagtgatccgg
ctcgagatcgaaagttcgatgccgcgggcgctcaagcgccagatcggcgagcagctcggc
gtaaaagagggcgacgtcttcgaggtccagggcttccttggactcgccgatgcccgcaag
atttgcgacatcgagcgacccgatctcaagttcaccccttaccatgctcgttttcccgag
cgcattcgcgactataatggcgacagttttgccgccatccgcgccaaggacatcctggtg
caccacccgttcgagagctttgacgtggtggcgcagttcctgatgcaggcagcgcgcgat
ccggacgtcgtggccatcaaacagacgctctaccgcacctctgccgacagcccgatcatc
aaggccctggtcctggcagccgaggccggcaagtccgtgacgtgcctggtcgagcttaag
gcgcgtttcgacgaggaggccaatatccgctgggcccgcgacctcgaacgggccggcgcg
caggtggtgttcggcttcatcgagctcaagacccacgccaagctcagccaggtggtgcga
cgcgaaaagggcaagctggtaagctactgccacatcggcaccggcaactaccacccgatc
accgccaagatctataccgatctcagctacttcacgatcgatccctcgatcacccgtgat
gtcgcgcgcgtgttcaacttcatcaccggatatgcccggccgacggaactggagaccatc
gcagtgtccccggtgaacctgcggcagacattgctggacaacatcgccgcggagatggat
ttcgcgagcaacggtcagccggccagcatcctgctcaagatgaactcgctggtcgacccg
caggtcatcgacgctctgtacgacgcgagccaagcgggcgtgaagatcgatctcatcgtc
cggggcatttgctgcctgcggccgggcattccgggattttctgagaacatccgggtgaag
tcggtcgttgggcgcttcctagagcactcccggatctattgctttggcaatggcgaaagc
atgcccaacccacgggccaaggtctatatttcctctgccgacctgatgggccggaacctg
gatggtcgcgtcgaggttatggtgccgattctcaacaagaccgtgcataagcaaatcctc
gatcgcatcctggttgcgtatctgcgtgacaaccagcagagctgggaggtattgccggac
ggcagttcgcaccgtgtgcgcagtggtgagggggaagagcccttcaatgcgcataactac
ttcatgaccaatccgtcgttgtcgggacgcggtagcgccggcagcgatggcgaagagggc
ctggcttga
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