Devosia oryziradicis: JI749_16930
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Entry
JI749_16930 CDS
T09885
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
doy
Devosia oryziradicis
Pathway
doy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JI749_16930
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
doy01007
]
JI749_16930
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
doy03016
]
JI749_16930
Enzymes [BR:
doy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JI749_16930
Amino acid related enzymes [BR:
doy01007
]
Aminoacyl-tRNA synthetase
Class I (A)
JI749_16930
Transfer RNA biogenesis [BR:
doy03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JI749_16930
BRITE hierarchy
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1
tRNA-synt_1g
DUF903
tRNA-synt_1c
tRNA-synt_1e
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QQR35993
LinkDB
All DBs
Position
complement(3404196..3405845)
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AA seq
549 aa
AA seq
DB search
MSSAKLPPLDPAFFDAAQTARAWPFEEARKLVKRLEKSGKGEALFETGYGPSGLPHIGTF
GEVARTTMVRTAFRLLTRDQVPTRLLCFSDDLDGMRKIPDTVPSKEAMEPHLQKPLTSVP
DPWTNEFDSFGHHNNAMLRRFLDTFGFDYEFASATDYYKSGRFDAVLRRAAERYDDIMKV
MLPTLGAERQATYSPFLPISPISGRVLYVPMKEVDAKNGMVTFEDEDGRDTTVPVTGGHV
KMQWKPDFGMRWAALGVDFEMFGKDHQTNAPIYDKICEILGGQAPEHYVYELFLDSEGQK
ISKSKGNGLTIDEWLTYASTDSLGLYMFQKPRTAKRLHFDVIPRAVDEYYSFNAGYQEQE
VAARLENPVFHVHFGNVPKIDMPVTFALLLNLATASNPETPEVMWGYISAYAPGVSPQTH
PHLDALVGYAMRYFRDFVKKTYRAPDDVERDALEKLSEAFAGLPSDANNEAIQNAALDVA
REIDRYQDHSKTGPNGGPGVSGEFFQMLYQVLIGQERGPRFGSFAALYGIDNTRKLIADA
LAGKFVKAE
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtccgccaagcttccgcccctcgatcccgcgttcttcgacgcagcccagactgcc
cgcgcctggccgttcgaggaagcccggaaactggtgaagcggctggagaagtcgggcaag
ggcgaggccctgttcgagacgggctatggcccttcgggcctgccccatatcggcaccttc
ggcgaagtggcgcgcaccaccatggtgcgcacggcctttcgcctgctgacgcgcgaccag
gtgccgacgcgcctgctgtgcttttccgatgacctcgatggcatgcgcaagatcccggac
accgtaccctccaaggaggcgatggagccgcatctgcagaagccactgacttcggtgccc
gatccctggaccaacgagttcgacagcttcggccaccacaacaacgccatgctgcgccgc
ttcctcgataccttcgggttcgattacgaatttgccagcgccaccgactactacaagtcc
ggccggttcgacgccgtgctgcgccgcgcggccgagcggtacgacgacatcatgaaggtg
atgctgccaacgctgggcgccgagcgccaggcgacttattcaccgttccttccgatctcc
ccgatctccgggcgtgtcctctatgtgccgatgaaggaagtcgacgccaagaacggcatg
gtcaccttcgaggatgaagacggccgcgataccacggtgccggtcacgggcggccacgtt
aagatgcagtggaagcccgatttcggcatgcgctgggcggcgctgggcgtcgatttcgag
atgttcggcaaggaccaccagaccaacgccccgatctacgacaagatctgcgaaatcctc
ggcggccaggcacccgaacactacgtctacgaactgttcctcgattccgaggggcagaag
atctccaagtccaagggcaatggcctcaccatcgatgaatggttgacctatgccagcacc
gatagcctggggctctacatgttccagaagccgcgcacggccaagcggctgcatttcgac
gtcatcccgcgcgcggtggacgagtattacagcttcaacgccggctaccaggagcaggag
gttgcggcgcgcctggaaaatccggtcttccacgtgcatttcggcaacgtacccaagatc
gacatgccggtgaccttcgccctgctgctgaacctggcgaccgcgtctaacccggaaacg
ccagaggtgatgtggggctatatctcggcctatgcgccgggcgtttcgccgcagacccat
ccgcatctggacgcgctggtcggctacgccatgcgctacttccgcgacttcgtcaaaaag
acctatcgcgcccctgacgatgtcgagcgggatgcgctcgaaaagctgtccgaggctttc
gcaggtcttccgtccgacgcgaataacgaagccatccagaacgccgctctcgacgtggcc
cgtgagatcgaccgttatcaggatcactccaagaccggccccaatggcggcccgggagtg
tccggcgagttcttccagatgctctatcaggtgttgatcgggcaggaacgcggtccgcgc
ttcggctcgtttgccgcgctctatggcatcgacaacacgcgaaagctgatcgccgatgcc
ctggccggaaagttcgtcaaagccgaataa
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