Dendroctonus ponderosae (mountain pine beetle): 109544056
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Entry
109544056 CDS
T04899
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109544056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109544056
Enzymes [BR:
dpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109544056
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109544056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
109544056
NCBI-ProteinID:
XP_019769632
EnsemblRapid:
LOC109544056
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MSTCAPPRHIEAASVKFSVLTEEDVKKISVFQIVTPLTLDSLGHPVVGGLYDNRLGPSTD
RNQPCGTCSKNSTLCPGHFAYIDLPVPCVNPLFHKVVGTILKLSCLSCHQMQLSKESRAK
IENLKQTEHSDWDLIQMEIVKIILDEAKAGTFCMHCKTPLNKIQVLAKRILMICRKNDSQ
ADGSRLKIKEMESKYINPSQSQCFLRDIWDAEEDLIKYMVPILNDVKLPHPTDVFFYKVV
LVPPPNVRPLNYLNGKVIENTQTNMYKDLVTNALVMNHLIRVVQKKGNLGVLDSKESMEF
YLAARGSTPVEKLNNCWEDLQGNVNDLLSKESRNNKGGMGLKQIIEKKQGIIRQHMMGKR
VNFAARSVITPDPNLDVSEVGVPEVFAKKLTCPVPVTPWNVEHLRQLVKNGPDVHPGAVL
VEMEDGSITKINPLNKVQQDGLLKMLLTPHHSSRPGFQGIKIVHRHLQNGDVLLLNRQPT
LHKPSIMAHRARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQDEVARSEGYNLVEVA
QQYLVPKDGTPLSGLIQDHMIAGVKLSLRGRFFNRSDYHQLVFQALSHKTERIDLLPPAI
IKPLQLWSGKQILSTVIINILPKGKVPINLKAGTKISANAWQKYPPRKWKAGGSPFEKPN
EMSEAEVIIRKGELLCGILDKTHYGATAYGLIHCIYELYCGTYAIRLLSSLAKLFTSFLQ
LEGFTLGVHDILTVRKADRKRKKIIEESRRIGKDVVSKALGISADASLEEMTLRIEEQCA
LDPKFRQIIDRAYKSSLDSYTNAINKCCLPAGLQCKFPENNLQLMVQSGAKGSTVNTMQI
SCLLGQIELEGKRPPVMISGKSLPSFPVFEFSPRAGGFIDGRFMTGIQPQEFFFHCMAGR
EGLIDTAVKTSRSGYLQRCLIKHLEGLHVGYDLTVRNSDQKVVQFLYGEDGLDISKAQFF
NEKRLQFLSDNEKCIVQKDILKQLTSDENQQLVEEHKVKLNYWTINNGSPLEKRRMSAFN
HFASECSKQFGKILKYKKVVKMWREASDDLKDSLKTALICPDPVNTVFQPDHHYGVLNER
LDSLMTSFTEAKNSKNTKRFQKMFKLKVMQSLCAPGEPVGLLAAQSIGEPSTQMTLNTFH
FAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFQPVFNLEVRAKDLRKILTRVVLAD
VLERVDVTVKLVIHPIRKHQYTLAFHILPPNCYDEEYKASTKSILKHIKKVFFKALFVSI
GKVSKIKSNLVTMENDPKVNLGGDNESDDEGPRTKGKKTNAAGNEEDSSDDELEDDENAK
LASKHAERNEDQEPEDEDERRYAASDEEGDDADNNPSTESAVAGDSVVENYSFAEGYKED
RKRCFCELTFSLPMSYKKLDLTAILRDVASKSVVWETPNIKRAFSYMKDQEYILKTDGIN
VAEMFKYHDLLQLNRLHCNDVHKMADTYGIEAATKIIVKEVKDVFNVYGIQVDPRHLSLI
ADYMTTNGTYEPMSRKGMESSASPLQQMSFESSSQFLKAATIKGRTDNLQNPSSSLMLGK
PNKIGTGLFDLVQKLPALHV
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtgtgctccgccccggcacattgaggccgcaagcgttaaattctctgtactc
actgaagaggacgtgaagaaaataagcgtttttcaaattgtgactcctctaactttggat
tccttgggccaccctgtagtaggggggctgtacgacaacagattgggaccctcaacagac
agaaaccagccgtgtggcacttgcagcaaaaacagcaccttatgtcccgggcattttgcc
tatatcgatttaccggtgccctgtgtgaacccccttttccataaggtggtcggcactatt
ttgaagctatcgtgcttgagctgccatcaaatgcaattatctaaagaaagccgcgcaaaa
attgagaacctaaaacaaacagagcacagtgactgggacctgattcagatggaaattgtt
aaaataattctagatgaagcaaaggccggcacgttttgtatgcattgcaagacccctttg
aataaaattcaagtactggccaaaagaattctaatgatttgcaggaaaaatgacagccaa
gccgatggatccagattgaaaatcaaggaaatggaatccaaatatattaatccatcgcag
tcgcaatgtttcctaagggacatatgggacgccgaagaagatttgatcaaatacatggtc
cctattttaaacgatgttaagcttcctcatcccaccgatgtctttttctacaaggttgtt
cttgttccgccacccaatgtccgaccgctcaactatctaaatggcaaagtgattgaaaac
acacaaaccaatatgtacaaggacctggtaaccaatgccctagtaatgaatcatttgatt
cgagtcgtccagaaaaaaggaaatttgggcgttttggactccaaagaatccatggagttt
tatttggctgcccgaggcagcacgccagttgaaaaactgaacaactgttgggaagatttg
caagggaatgttaatgacctgttgtcgaaggaatcaaggaacaataaaggaggaatgggt
ctaaaacagatcatcgaaaaaaaacaagggatcattagacagcacatgatggggaaacgt
gttaacttcgcagcaagatcagttatcacaccagatcccaatttggatgtcagtgaagtc
ggtgttcccgaagtatttgcgaaaaaattaacttgtcctgtacctgttacgccatggaat
gttgaacatttgcgacaactagtgaagaacggtcctgatgtgcacccaggcgccgttttg
gttgaaatggaggatggaagcattaccaagatcaatccgctgaacaaagttcaacaagac
ggcttgttgaagatgcttcttacacctcaccattcaagtaggcctggttttcaaggcatc
aaaatagtccatcggcatttacaaaacggcgatgttttgttactaaacaggcagcctacg
ttgcacaaaccctcaatcatggctcaccgagcccggattttaaaaggggagaaaactttg
aggctgcattatgcaaattgcaaggcgtataatgctgattttgacggcgacgaaatgaat
gcccactttccacaagacgaagtcgctcgtagcgaaggatacaaccttgttgaggtggct
caacagtatcttgtacctaaggacggaacaccgctaagtggcctaattcaagatcacatg
attgctggggtcaaactctcattacggggcagattcttcaacagatctgattatcatcag
ctagttttccaggccctttcccataaaaccgagagaattgatctcctaccgccagctata
ataaaacctttgcaactatggtcgggaaaacaaattttgtccacggtgatcataaatatt
ctaccaaaaggcaaagtgcccattaatttgaaagcgggaacaaaaatttccgcaaacgct
tggcaaaaatatcctcccaggaaatggaaagccggtggaagcccatttgagaaaccgaac
gaaatgagtgaggcagaagtgattattcgcaaaggagaactattgtgtggaattctagat
aagactcactatggcgcaaccgcttacgggttgatccattgcatttacgaattatactgc
ggaacttatgctataaggctgctcagttctttagccaagttatttactagctttcttcaa
ctggagggttttactttgggtgttcatgatatattaacggtaagaaaggcagatcgaaag
agaaaaaaaataattgaagaatccagacgaattgggaaagatgtagtttcaaaagcgctg
ggcatctcagcagatgccagcttggaagaaatgactttaagaattgaagaacagtgcgca
ctagatcccaaatttagacaaataatcgatcgggcatataaaagcagtctggactcatat
acaaacgcgataaacaaatgttgccttccggctggtttacagtgcaagtttcctgaaaat
aatctacagttaatggttcagtcaggtgcgaagggttccacggttaacaccatgcagatt
tcctgtcttttggggcaaattgagctggaaggaaagcgtccaccggttatgatttctgga
aagagcctaccaagctttccagtcttcgaattttctccacgggctggcggatttatcgat
ggccgttttatgaccggtattcagccgcaggaatttttctttcactgcatggcaggcagg
gaagggcttatcgatactgctgtaaaaaccagtcgaagtggttacttgcaacgatgcctt
attaagcacttggaaggtcttcatgttggatatgatttgactgtaaggaatagtgatcag
aaagtagtgcagtttctctacggcgaagatggacttgatataagcaaagctcaatttttc
aatgaaaaacgcctgcaatttttaagcgataacgagaaatgtattgtacaaaaggacatt
ttgaagcagttgaccagcgatgagaatcagcagttggtggaagagcacaaagtaaagctt
aattactggacaattaataatggatcaccattagaaaaacggcgaatgtccgcttttaac
catttcgcttccgaatgttccaagcaatttgggaaaattttgaagtacaagaaagtggta
aaaatgtggagagaagcctctgatgatttaaaagattcgctcaaaacagcattaatttgt
ccagatcctgtaaacactgtattccaacccgaccatcactatggagtattgaatgaacga
ttggattctttaatgactagttttacagaagcgaagaacagtaaaaatacaaaacggttt
cagaaaatgtttaaactgaaagtgatgcagagcttgtgcgcccctggcgaacctgttgga
ttacttgctgctcagtcgattggagaaccatcaacccaaatgacactgaacaccttccac
tttgccggcagaggtgaaatgaatgtaactttgggtattccgcgtctcagagaaatttta
atgatggcttcaaaaaacataaaaactccgtctatggaaattccgtttcaacccgtgttt
aacttggaagtgcgagctaaagacctgagaaaaatcctcaccagagtcgtgctcgccgat
gttttggagagggtcgatgtcacggttaagttagtgatacacccaataaggaaacatcag
tacacattagcttttcacatccttccgccaaactgctatgatgaagaatacaaggcttca
acaaaatccatactaaagcatataaagaaagtgttttttaaggcgttgtttgtaagcatt
ggcaaagtgtcgaaaattaaatcgaatttggttaccatggaaaatgacccaaaagttaac
ttaggtggagataatgagagcgatgatgaaggaccaagaacaaaaggcaagaaaacaaat
gcagctggaaatgaagaagacagttctgatgatgagttggaagatgatgaaaatgcgaag
ctagcgtctaaacatgccgagaggaacgaggatcaagaaccagaggacgaagacgagcga
agatacgcagcaagtgatgaagaaggtgacgacgcggataataacccgtcgacagaatcg
gcagtagctggcgactctgtagttgaaaattactcgtttgctgagggctacaaagaagac
agaaagcgctgtttttgtgaactcacattcagcttacccatgagctacaaaaagctcgac
ttgacggctattctgcgagatgtggcaagcaagagtgtggtttgggaaacccccaacatt
aaacgcgccttcagctacatgaaagaccaagagtatattctcaaaacggatggcattaat
gtggccgagatgttcaagtatcatgatctacttcaattgaaccggcttcactgcaacgat
gtgcataaaatggcagacacgtacggcattgaagcagcaacaaagatcattgttaaggag
gtgaaagatgtgttcaatgtctatggcatccaagtagatcctcgacatttatcactaata
gccgactacatgaccaccaatggaacctacgaaccaatgagccgcaagggaatggaatcg
agtgcgtctccgctacagcaaatgtcttttgaatcttcgtcgcaatttctgaaagcagcg
acaatcaaaggtcggacggacaatcttcaaaacccttccagcagtctgatgcttggaaaa
cctaacaaaattggaacagggctgtttgaccttgttcaaaaacttcctgctcttcatgtt
taa
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integrated database retrieval system
