Drosophila persimilis: 6596937
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Entry
6596937 CDS
T01063
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dpe
Drosophila persimilis
Pathway
dpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
6596937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpe03400
]
6596937
DNA repair and recombination proteins [BR:
dpe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
6596937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
6596937
NCBI-ProteinID:
XP_026845353
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MSKKLNTSVGGTPTNTLFNYFTKSPAVDKKKLVPSVKAESTPTDRTDSEKENLNNGKNLE
VKKETETKPSAKRKLPISTPSDEEELGGRRKRKRIVLPESESEDEMEETKSEDDFSGDES
DYEPDGKDDAASEESESGDDEGEEPMDDEESEDDPTPKKSRNKDKNHNNNNNEPVGQKVK
LAEGSTFQEKLKNIQSNVKQDAAYDEIVTTSSSLDEPVVWPHQKLEFLQPDKIKDKEGRR
PDHPDYDKSTLHVPEKFLNNLSPGVRQWWVLKSNNFDCVLFFKVGKFYELYHGDADVGVN
ELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTETPDMVTERCKRIKSTKFD
KVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLALVEQEEGTWSRFGICFIDTSIGDFH
LGEFEDDKNCSRLLTLLSHHMPVLLLSEKSALSLRTQQVVRTVLGGILREQLPSNGAHVC
NAEKTLKLLAERYYAGNGSEDNWPLVLRTMQSDSDHLGLTPSDNYKLALKALGQCVYFIN
KCLLEPKVLPMARYQMYVPPDQLAEAKPAVVSALRRSHMVLDATTLSNLRIIGEEHTLQS
TLDHCCTKFGKRLLHHWLCAPSCDIEILKERQAAIGELLRLPSELQEMRALLAPMPDFER
NLAQIHLFGNKQVKQTGHPDSRAILFEEKIYNKQKLVGFMAVLKGFNALTKLPLMFQQCE
TPLIKRITQLTTSGGSFPDLSEELRYFSTAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIE
EIEKRLKTYLVEQERHFGCRVTYFGSDKKRYQLDVPESHAHKANKSYALEGQTKGKKPSR
RYTTAETKGLLKDMQQAEDAKNAVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVLGSLA
EYARQQMVICVPELVSGVDQPFIELQEGYHPCVNTLTYIPNGLELGTKTEAPLSLLTGPN
MGGKSTLMRELGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNE
TSLILKHATCHSLVLLDELGRGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDYFH
NDQRVTLGHMACMVENEDTTDPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRA
FELSKKVEAIALQRKITAKIVASSGEKEFKQQKLHALKDLLQQLKMCHV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaagctgaatacgagtgtgggcggaacgcccacaaacaccttgtttaactat
ttcaccaagtcaccagccgtcgacaaaaaaaagcttgtgcccagcgtaaaggcggagtca
acgcctactgacagaacggactcagaaaaggagaatctcaacaatggcaagaacctggaa
gtgaagaaggagaccgagaccaagccttcggcaaagaggaagctgccaatttcgactccg
tcggatgaggaggagcttggtggtcggcgcaaaagaaaacgcatcgttctacccgagtcg
gagagcgaagatgagatggaggagaccaaatccgaagacgacttttccggcgatgagtct
gactatgaaccggacggaaaggatgatgctgccagtgaggaaagcgagagtggcgacgat
gagggtgaagagcctatggatgacgaagaatcggaagacgatcccacgcccaaaaaatcc
cgcaacaaggacaaaaaccacaataataacaacaatgagccggtgggccaaaaggttaaa
ctggctgaaggctccacattccaggagaagctaaaaaacatccagagcaatgtgaaacag
gacgcggcctacgatgagatagtgaccacttcatcgagcctcgatgagcctgtggtgtgg
cctcatcagaagctcgagttcttgcagccggacaagattaaggacaaggagggcaggcgc
ccagaccatccggactacgataagagcaccctgcatgtgcccgaaaagttcctcaacaac
ctgtcgcctggcgtgcgacagtggtgggttctgaagtcaaacaactttgactgcgttctg
ttctttaaagtgggaaaattctatgagctgtaccatggggatgccgatgtgggtgtcaat
gagctgggatttacctatatgcgtggcgagtttgctcactctggtttcccggagatatcc
tttgataaaatgtccacaatcctgatagataggggctacaaggtggctcgagtggagcaa
acggaaacgcccgacatggtgacagaaaggtgcaagcgcattaagtccaccaagttcgac
aaggtcgtggcccgtgagatctgtcagatcacgaatcggggaactcaggttttcgggtcg
cagtgtaaaatcggtcccaatcatcagcccaactacatgttggccctggtggagcaagag
gaggggacgtggagcaggtttggcatttgctttatagacacatccatcggggactttcac
ctgggcgagttcgaagacgataagaactgctctcgattgctcacgctgctctcccatcac
atgcctgtgctccttctcagcgagaagtcagccctcagcttgcgcactcaacaggtcgta
cgcaccgtgctcggaggaatactgagggagcaactgcctagcaatggagctcatgtctgc
aacgctgagaagactctgaagctcttggccgagcgatactatgccggaaacggatccgag
gacaactggccgttggtcctacgcactatgcagtccgattcggatcacttgggtctcacg
ccctccgacaactacaagctggcattgaaggctctgggtcagtgcgtctatttcatcaac
aagtgtttgctggagccgaaagtactgcccatggctcgctaccagatgtatgtgccgccc
gatcagctggcagaggccaagccagcagtggtctccgccctgagacgctctcacatggtc
ctcgatgcaacaactctgtcaaacttaaggatcatcggcgaagaacacaccctgcagtcc
accttggaccattgctgcaccaagttcgggaagcggctgctgcaccactggctctgtgcc
cccagctgcgatatagagatactaaaagagcgacaggcagccattggagagctgttgcgg
ctgcccagtgagctgcaggagatgcgggcattgctggcccccatgcctgactttgagcgt
aatttggcgcaaatccatctgttcggcaacaagcaggtcaaacagaccggtcacccagac
tcccgggccatactcttcgaggagaagatttacaacaaacagaagctagtgggctttatg
gcagttctcaagggattcaatgctctgaccaagctacctctgatgttccagcaatgtgag
accccactgatcaagagaataactcagctgactacttcgggaggatcctttcccgacctc
agcgaagagctgagatacttttccactgccttcgaccacgatgcagctgccaagacggga
gtaattgcgcctcagcccggaatggatgcagagtatgatgtagtcatggatcggatagaa
gagattgagaaacggctcaagacctacctcgtggagcaggagcgtcactttggctgccgt
gttacctactttggctccgataagaagcggtaccagttggatgttcccgagtcgcatgcc
cacaaggccaacaaatcgtacgccctggaaggtcagaccaagggaaagaagccctcgcgt
cgctacaccaccgcagagaccaagggactgctcaaggacatgcagcaagcagaagatgcc
aagaacgccgtgcttaaggacctggcccgtcgcctcttcgagaagttctccaaccattat
gagcagtggaagcagtgcatcgactgtgtcgccaatctggatgtgttgggctccctggca
gagtacgccaggcaacagatggtcatctgcgtaccagagctggtctctggagtagatcag
ccgttcatcgaactgcaggagggctatcatccctgtgtgaataccttaacctatattcct
aatggcctggaattgggtaccaaaacggaagcccccctatccctgctcactggacccaat
atgggaggcaagagcaccttgatgagggaactgggtctactggtgatcatggcacagatt
ggcgctcacataccagcagctagctgtcgtctttccttggtggatagaattttcacgcgg
ctgggcgctcaagatgatattttggccgggcacagtacgttcttggtggagctgaacgag
acttctctcatactgaagcatgccacatgccattccctggtgctgctcgatgagttgggc
aggggcacggccacatacgatggcacagccattgccgcttctgtggtcaatttcctagcc
aatctcaagtgtcgcaccctcttttccacccactaccacaatctaatcgattacttccac
aacgaccagagggtcaccctcggtcacatggcttgcatggtggaaaatgaggataccaca
gatcccactcaggaaacggttacgttcctctacaagtacacggccggtgcttgtcccaag
tcgtacggcttcaatgcggccaaattggctggcatgccccagggcattataaagcgggcc
tttgagctctccaagaaagtggaggccattgccctgcaacgcaagattacggcaaagata
gtagcctcgtcgggagaaaaggaattcaagcagcagaaactacatgcgttgaaggaccta
ctacagcagttgaaaatgtgccatgtctaa
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integrated database retrieval system
