Dyadobacter pollutisoli: ON006_17125
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Entry
ON006_17125 CDS
T09794
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf00540
Lipopolysaccharide biosynthesis
dpf01100
Metabolic pathways
dpf01250
Biosynthesis of nucleotide sugars
Module
dpf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ON006_17125 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dpf01005
]
ON006_17125 (rfaD)
Enzymes [BR:
dpf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
ON006_17125 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
dpf01005
]
Core region
ON006_17125 (rfaD)
BRITE hierarchy
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
WAC09475
UniProt:
A0A9E8N495
LinkDB
All DBs
Position
4188806..4189771
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AA seq
321 aa
AA seq
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MIIVTGAAGFIGSGLISRLNQDGFKNIIAVDDFSKIDKAENLEGKTIKEKVERDTLFEWL
DQNNRDVEFIFHIGARTDTTEFDKEIFDELNVNYSKQIWEKCVAYQIPLVYASSAATYGL
GEHGYDDNESTLSQLKPLNPYGDSKNEFDIWALQQEKKPFFWAGLKFFNVYGPNEYHKGR
MASVIFHAYNQIKATEKMKLFRSHNPDFKDGEQMRDFIYVKDLIDVCIFFMHHRKNSGIY
NLGSGRARTFKDLVTNTFIAMGKTPDISFVDTPVDIRDKYQYFTQANMSKLRSIGFTKPF
TSLEDGVADYVKNYLSSGSYL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacaggtgcagccggattcattggcagcggacttattagccgcctcaat
caagatggttttaaaaacattattgcagttgatgatttttcgaaaattgataaagcggaa
aatctggaaggaaaaacgatcaaggaaaaagtagaaagggatactctttttgaatggctt
gatcaaaacaaccgggatgtggaattcatctttcacattggtgccaggacggacacgacg
gagtttgacaaagaaatattcgatgagctcaatgtcaattattccaagcagatctgggaa
aagtgtgtagcctatcaaattccccttgtatatgcatcgtcggctgccacttacggcctc
ggcgagcatggatatgatgataatgaatctacattatcgcagctgaaacctctgaaccca
tacggcgattctaaaaatgaattcgacatctgggcattgcagcaggaaaagaaacctttc
ttctgggccggattgaaattcttcaacgtatacgggccgaatgaatatcacaaaggcaga
atggcttccgttattttccatgcttacaaccagattaaggcgactgagaaaatgaaactt
ttccggtcacacaaccctgattttaaggatggcgaacaaatgcgtgattttatttatgtg
aaggacctgatcgatgtatgtatctttttcatgcaccaccgcaagaactcaggcatatat
aacctgggtagcgggcgcgcaagaacattcaaagacctggtgaccaataccttcatcgcg
atgggcaaaacgcctgatatttctttcgttgatacgcctgtcgacattcgagacaagtac
cagtattttacacaggccaacatgagcaaactccgctcgataggcttcacaaagccattt
acttccctcgaagacggtgtggccgattacgtgaagaactacctcagctcaggctcatat
ttataa
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