Deinococcus psychrotolerans: EHF33_09465
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Entry
EHF33_09465 CDS
T07550
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dph
Deinococcus psychrotolerans
Brite
KEGG Orthology (KO) [BR:
dph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dph03009
]
EHF33_09465 (rimO)
Enzymes [BR:
dph01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EHF33_09465 (rimO)
Ribosome biogenesis [BR:
dph03009
]
Prokaryotic type
ribosomal protein modification factors
EHF33_09465 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AZI42943
UniProt:
A0A3G8YDF2
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All DBs
Position
1:1916913..1918418
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AA seq
501 aa
AA seq
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MTVLDFTDQFASQPQHKNKVGFISLGCPKALVDSERILTQLRVEGYQIADNYGEADTVIV
NTCGFITPAVEESLAAIGEALDATGKVIVTGCLGERPEKILERHPKVAAITGSEAVDDVM
RHVRELLPMEQNPFTDLLPTAAPGARSGVSAPVREATSHGDVFAPSVKLTPRHFAYLKIA
EGCNHTCSFCIIPKLRGKQVSRDAAAVLYEAYRLVAGGTKELVVISQDTSAYGVDIRYRE
SEFQEQQVRAHLTDLAAKLGEMGAWVRMHYVYPYPHVEKVVELMAAGKILPYLDVPLQHA
SPKILRAMRRPGAGKQLDTIRRWREICPELVIRSTFIVGFPGETESDFQELLTFLQDARL
DRVGAFPYSDVEEADANALGNPVPEDVKQERLARFMEVAQRISAEKLAEKVGRVMPIIID
EFNDDEGDAAGTRLIGRTKGDAPGIDGQVYLYAGEFAGQIKIGDIVEARIEESDEYDLFG
EVVARPAWLPNVPQMGHFGGH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcttgatttcaccgatcaatttgcaagccagccccaacataaaaataaagtg
ggctttatcagcctgggttgccccaaagccctcgtggattccgagcggattttgactcag
ttacgtgtggaaggctaccagattgccgacaactacggcgaggccgataccgtgatcgtc
aacacctgcggctttatcacgcccgctgtagaggaaagtctggcagcgattggcgaggcg
ctggacgccaccggcaaagtcatcgtgaccggctgcctcggcgagcggcccgaaaagatt
ctggagcgccatcccaaagtggcggccattaccggcagcgaagcggtggacgatgtgatg
cgccacgtgcgcgagctgctgccgatggagcaaaacccctttaccgatttgctgccgacc
gccgcgccgggtgcccgcagcggcgtgagtgcgcccgtgcgtgaggccacctcgcacggc
gacgtgttcgcgcccagtgtcaagctcaccccacgccacttcgcttacctcaaaattgcc
gagggctgcaaccacacctgctcgttttgcatcattcccaagctgcgcggcaagcaagtc
agccgcgacgccgccgccgtgctgtatgaggcctaccggctggtggcgggcggcaccaaa
gaactggtcgtcatctcgcaggacaccagcgcttacggcgtggacatccggtatcgcgag
agcgaatttcaggagcagcaagtccgcgcccatctgaccgacctggccgccaagttgggt
gaaatgggagcctgggtcagaatgcactatgtctacccgtatccgcacgtggaaaaagtg
gtggaactgatggcggcaggcaagatcttaccgtacttggatgtcccgctccagcacgcc
agccccaaaatcttgcgggccatgcgccgccccggagcgggcaagcagctcgacaccatc
cggcgctggcgtgagatctgccccgaactggtgatccgctcgacctttatcgtgggtttt
cctggcgaaaccgagagcgactttcaggagttgctgacctttctgcaagacgcccgctta
gaccgcgtgggcgcgtttccctacagcgatgtggaagaagccgatgccaacgcgctgggc
aaccccgtgccggaggacgtcaagcaggaacggttggcccgctttatggaagtggcccaa
cgtatcagcgctgagaaactggctgaaaaagtgggccgggtcatgccgatcatcatcgac
gagttcaacgatgacgaaggcgacgccgccggaacgcgcttgattggccgcaccaaaggc
gacgcaccgggcattgacggacaggtttacctctacgcgggcgagttcgccggacagatc
aaaattggggacatcgtggaagcccgcattgaggaaagcgacgagtacgacctcttcggc
gaagtggtggcccgccccgcctggttgccgaatgtgccgcagatggggcatttcgggggg
cactga
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