KEGG T08834: 127843611

Dreissena polymorpha (zebra mussel): 127843611

Entry

127843611         CDS       T08834

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like

K03011

DNA-directed RNA polymerase II subunit RPB3

Organism

dpol Dreissena polymorpha (zebra mussel)

Pathway

dpol03020

RNA polymerase

dpol03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:dpol00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127843611
  09124 Replication and repair
   03420 Nucleotide excision repair
    127843611
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpol03021]
    127843611
   03400 DNA repair and recombination proteins [BR:dpol03400]
    127843611
Transcription machinery [BR:dpol03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     127843611
DNA repair and recombination proteins [BR:dpol03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127843611

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_L

Other DBs

NCBI-GeneID:

127843611

NCBI-ProteinID:

XP_052229259

LinkDB

Position

9:complement(75388577..75420921)

AA seq 223 aa
MAIDWVQIEANSSVLFDEFISHRIGLIPLTSDDVVDRLQYSRDCTCEEFCPECSVECQDD
VTRHVTSADLISSNPKIVPVTSRHKEEASEYEDTDDILIVKLRKGQELKVKAFARKGFAK
EHAKWNPTTGVAFEYDPDNALRHTTYPKPEEWPKSEFSELEEDEHQAPFDPNGFPNKYYY
NVESCGSLKPENIVFSALAKLKEKLSNLQTQLSHEIQSDVLAV

NT seq 672 nt +upstreamnt +downstreamnt
atggctattgactgggtgcagattgaagccaactcttctgtgctgtttgatgagttcatt
tcacatcgtatcggactcattcctcttacaagtgatgacgttgtggaccgtttacagtat
tccagggactgcacgtgtgaggagttttgtccagagtgctccgtggaatgccaggatgat
gtcacgcgtcatgtgaccagcgcagacctcatctctagcaaccccaagatagtgccggta
acttcgaggcacaaagaagaggccagtgaatacgaagatactgatgacatcctgattgtc
aagttacgtaaaggtcaagagttgaaggtgaaggcctttgctcggaagggttttgccaag
gagcatgccaagtggaaccctacgacgggcgttgcgtttgagtatgacccagataatgcc
ctgcgacatactacctaccccaaaccagaggaatggccaaaaagtgaattttcagagctg
gaggaagatgaacaccaagcgccgttcgatcctaacgggtttcccaacaagtactactac
aatgtggagtcgtgtggctccctgaagcctgagaacattgtgttctcggcactcgcaaaa
ctcaaagaaaaactgagcaatctgcaaacacagttgagccatgaaatacagtctgacgtg
ttggcggtgtga

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