KEGG   Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_148388
Entry
DICPUDRAFT_148388 CDS       T02090                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
dpp  Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03020  RNA polymerase
dpp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DICPUDRAFT_148388
  09124 Replication and repair
   03420 Nucleotide excision repair
    DICPUDRAFT_148388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpp03021]
    DICPUDRAFT_148388
   03400 DNA repair and recombination proteins [BR:dpp03400]
    DICPUDRAFT_148388
Transcription machinery [BR:dpp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DICPUDRAFT_148388
  RNA polymerase III system
   RNA polymerase III
     DICPUDRAFT_148388
  RNA polymerase I system
   RNA polymerase I
     DICPUDRAFT_148388
DNA repair and recombination proteins [BR:dpp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DICPUDRAFT_148388
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 10506407
NCBI-ProteinID: XP_003284599
JGI: Dicpu1_148388
UniProt: F0ZB01
LinkDB
Position
Unknown
AA seq 129 aa
MADYDGEDAGFEDFEDAGYEDEYIEEENQQEAYTDIVDPNQENSAEAGKIPNHLRRTTRY
MTKYERARLLGSRALQISMNAPIMVELEGETDPLQIAWKELRAKKIPLIIRRYLPNGMYE
DWSVDELSI
NT seq 390 nt   +upstreamnt  +downstreamnt
atggctgattatgatggtgaagatgctggctttgaagattttgaagatgccggttatgaa
gatgaatatatcgaagaagagaaccaacaagaagcctatacagatattgtagatccaaac
caagaaaatagtgcagaagcaggtaaaattccaaatcatcttagaagaacaactagatat
atgactaaatacgaaagagctagattattaggttcaagagctttacaaatttcaatgaat
gcaccaattatggtcgaattagaaggtgaaaccgatccattacaaatcgcttggaaagaa
ttaagagcaaagaaaatccctttaattattagaagatatctcccaaatggaatgtacgaa
gattggagtgtagatgaactttcaatttaa

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