KEGG   Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_52854
Entry
DICPUDRAFT_52854  CDS       T02090                                 
Name
(RefSeq) hypothetical protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
dpp  Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DICPUDRAFT_52854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpp03019]
    DICPUDRAFT_52854
Enzymes [BR:dpp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     DICPUDRAFT_52854
Messenger RNA biogenesis [BR:dpp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     DICPUDRAFT_52854
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N CbiA AAA_24 ATP_bind_1 nSTAND3 AAA_21 AAA_10
Other DBs
NCBI-GeneID: 10510246
NCBI-ProteinID: XP_003284310
JGI: Dicpu1_52854
UniProt: F0ZA95
LinkDB
Position
Unknown
AA seq 421 aa
MTDVTQINESSTKTLEKHQELRYEIEFDQQGWMRLVEGTAECFGTELLLNKIYKLTSTKG
AVFTWTGCKIEITNNCSPYIGDKTPMQKYSAVFQEIENSRSNNFDPNQSGPRVMIVGPTD
SGKSSVSKILLAYSSRLGYEPLFIDLDPGQNSVTIPGTISASHIQSPIDIEEGLSSFVPL
AHFYGHASLDVNPELFKALVRNLAAFVDKQMLASETTRMSGFVVNTCGWIDGLGYKVLLD
NIEAFRINMIIVMDNEKLFSDLNSHFQQQQIKILKLPKSGGVFLRTPIFRKKTRMLKIKE
YFNGVNDSLSPHYIYLDFKDVSIFRTGGGPVAPASALPIGQQSSIDPLAISEVYPSIDMC
HSIVAISYAKQPQHIFSTNVAGFLYINDIDMETKKITVISPAPGPIPSRYLLIGTLKWTP
N
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgacagatgtaacacaaatcaatgaaagttcaactaaaactttagaaaaacatcaagaa
ttaagatacgaaattgaatttgaccaacaaggatggatgagattagttgaaggcacagca
gaatgttttggtacagagttgttattaaataaaatttataaacttacatcaaccaagggg
gcagtatttacatggacaggatgcaagatcgaaatcaccaataattgttcaccctatatc
ggtgataaaacccccatgcaaaagtattcagcagtatttcaagaaatcgaaaattcaaga
tcaaataactttgatccaaatcaaagtggaccaagggtaatgatcgtaggtccaaccgat
agtggtaaatcatcagtttcaaaaatacttttagcatatagttcacgtttaggatatgaa
ccattatttatagacttggatcctggtcaaaactcagtaactattccaggaaccatttct
gcatcacacattcaatcaccaatagatatcgaggaaggtttgtcttcgtttgtaccatta
gcccatttttacggtcacgcttcattggatgttaacccagaactctttaaagcattagtt
agaaatttggctgcctttgtagataaacagatgcttgcttccgaaactactagaatgtct
ggtttcgttgtaaatacttgtggttggattgacggtttaggttataaagttttattggat
aatatcgaagcttttcgtataaatatgattatagttatggataatgaaaaattatttagt
gatttaaattcacactttcaacaacaacaaattaaaattttaaaattaccaaaatctggt
ggtgtatttttaagaactccaatatttagaaaaaaaacaagaatgttaaagattaaagaa
tactttaatggtgtaaatgatagtttatcaccacattatatatatttagactttaaagat
gtatcaatatttagaacaggtggaggcccagttgcacctgcatccgcattaccaattggt
caacaatcctcaattgatcctcttgcaatctctgaagtttatccaagtatagatatgtgt
cactcaattgttgcaatttcctatgcaaaacaaccacaacatatttttagtacaaacgta
gctggtttcctttatataaatgatatcgatatggaaacaaaaaaaattaccgttatttca
ccagctccaggcccaattccttcaagatatttgttaattggtacattaaaatggacccct
aactaa

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