Dermatophagoides pteronyssinus (European house dust mite): 113788666
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Entry
113788666 CDS
T05775
Name
(RefSeq) DNA-directed RNA polymerase II subunit rpb1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dpte
Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03020
RNA polymerase
dpte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113788666
09124 Replication and repair
03420 Nucleotide excision repair
113788666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpte03021
]
113788666
03400 DNA repair and recombination proteins [BR:
dpte03400
]
113788666
Enzymes [BR:
dpte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113788666
Transcription machinery [BR:
dpte03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113788666
DNA repair and recombination proteins [BR:
dpte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113788666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
CTD8
YppF
Motif
Other DBs
NCBI-GeneID:
113788666
NCBI-ProteinID:
XP_027193932
UniProt:
A0A6P6XKK8
LinkDB
All DBs
Position
Unknown
AA seq
1421 aa
AA seq
DB search
MSYRVCCGHFGHIELKKPVLNYAFIKTVVNVLRCVCVSCARILAHPSDKRFRDVLLIKSK
PARLTAIANITRTVTTCPIYEDDNGNVIGCGASQPTFKRDNLEILADFSRSGGQEGKGGI
KTSVEKYFSTTEILSVFKKIRTTDIKLLGFDGVNTSPENLIIRNLIVMPPCVRPPVQFGA
DRCEDDLTAKYNDILLLNKQIKRFEEAGAASHVMTSSYSLLQYHVATLMNNEISGIPVAT
TRRKKPIKGIRERLKGKNGRLRGNLMGKRVDFSARTVITGDPNLDLDQVGVPYSIAMNLT
FPEIVINSNLDEMRMAVTNGPYKWPGAKYVIRKDGTRYDLRHCYNGSSDLQLEPGCVVER
HLRDGDYVLFNRQPSLHKMSIMGHRVKVLPYSSFRINLSVTSPYNADFDGDEMNMHVPQS
YETRAEIKYLCAVPYQTISPQSNKPVMGIVQDTLIGVTLMSDKNIFVTKKELMSLCLQVE
GWSGEIFPPTVWKPQKLWTGKQLFTLCLLSNNNIRIRSENPNFTSNDGHVIIEDGELLSG
VIDKKIVGATSGGLIHVLWHQCGVITTRNFIHILQRVVTAWMLTQGFTVGISDIIVADET
AKKISEVLQARQEAVKELFKKACSGNFETQPGKGLLRSFEAVSNSEFNSAREIAGKYATD
FLSNSNNIYRMVMSGSKGSMINISQIMACVGQQNVEGKRIPFGFNARTLPHFAKFDFNAD
SRGFVKNSYLSGLLPHELFFHAMGGREGIIDTACKTSETGYIQRRLVKAMEDVAVAYDGT
VRNSNNEIIQFFYGEDGIRGEFIEQQDLILMTMNYEKLKKRFFHDIYDENYGKGWLEPSI
AQEIISRVHTEILDREYQFLLDSQRMLQTEIFPDGEYKQYLPVKFERFINIAKKKFLQET
ICTVDPRDLVRQIDQLVDDLQPVRYADNIVLESVRCSMVLFVIQLRTYLNSLELLRYHKF
SQEALTWIFDSIKNTYRTSLIQAGEVVGCLAAQSIGEPATQMTLNTFHFAGVGAKNVTLG
IPRLRELLNVAINIATPSLTVYLDSETAKNSEFVRKLQGEIEFTTLEKFIKKIELVFDPE
IMSSCIPEDNEWVEDYYSLNEMNESSASSMSVWVLRLTLQQRLITEGLRLSEIGEKIKKL
LAHLQMSVIWTDDNSDQFIIRIRASKNSAKLLDLHSTLNTAEVGSEETIDLLTYLMETTL
PSIRLRGIPGIKKVYIREERAVKYNPDKGVYEPCNGGWILDTDGVNLASVFTLEHVDFTR
TISNNISEVLKILGIEAARAALLKEIRQVISFDGSYVNYRHLAILCDVMTHRGTLVPINR
HGINRVNKGLFAKSSFEETVEIFSDAAMFGEMDTLNGLTENIIFGQLANFGTGMSDIMID
YAKLKNANTYFESYSGAEWAKLNNTVENNDISKLRFKLFGL
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcgagtttgttgtggtcactttggccacatcgaattaaaaaaacctgtgtta
aattatgcttttataaaaactgtggttaacgtcctccgctgtgtttgtgtttcttgcgca
agaattctagcacatcccagtgacaagagattcagagatgtcttgctaataaaatctaaa
cctgctcgtttgactgcaattgcaaatatcactaggactgttactacttgtcccatttat
gaagatgacaacggtaatgttattggttgcggagctagtcaaccaacgtttaaaagagac
aacttagaaattttagctgacttttcgcggtctggcggccaagaaggcaagggaggaatt
aagacatcagtagagaaatacttttctaccactgagatattgtctgtatttaaaaaaata
agaaccaccgatataaagcttctcggttttgacggtgttaacacatcccctgaaaattta
ataattaggaatctaattgtaatgccgccctgtgttcgtccacctgttcaattcggagca
gatcgttgtgaagatgatttaacagcaaaatacaacgacattttacttttaaacaagcaa
attaaaagatttgaggaagcaggagcagcttcacacgtaatgaccagcagttatagttta
ctgcaataccacgttgcaactttaatgaataatgaaatctctggtattcctgtcgcgact
acccgtagaaaaaagcctatcaaaggtattagagaacgattaaaaggaaaaaatgggcgt
ctcagaggtaatttaatgggtaagcgtgtagattttagtgcgagaactgttatcactggt
gaccctaacttggatttggatcaggttggtgttccttatagtattgcaatgaatcttaca
ttccctgaaatagtgatcaattcaaatcttgatgaaatgcgaatggctgttacaaatggt
ccgtacaaatggccaggtgctaaatacgttataagaaaagatggtactagatatgacctg
cgtcactgttacaatggctcctctgatttgcagctcgaacctggatgcgtcgtcgaacgt
cacttgagagacggtgattatgtattgttcaatcgtcaaccttctttgcacaagatgagt
atcatgggtcacagagttaaggtattaccgtactctagtttcagaatcaatcttagtgta
acctctccgtataatgccgatttcgatggagatgaaatgaatatgcatgttccacaatct
tacgaaactagagcagaaattaaatatttgtgtgctgttccctaccaaactatatctcct
caaagtaacaaacctgtaatggggattgttcaagatacactgattggagtcactttgatg
tctgataaaaacatttttgttactaaaaaagaattaatgtctttatgtttgcaagtggaa
ggatggtctggagaaatttttcctcctacggtttggaaaccacaaaaactttggacaggt
aaacagttgttcacgctttgtttgctttcaaataataacattcgaattcgatctgaaaat
cctaacttcacgtccaacgatggtcatgttataattgaggacggtgagctgctttccgga
gttattgataaaaaaattgtaggagctacttctggtggtttaattcatgtgctatggcat
cagtgcggtgtcattacgacaagaaacttcattcatattttgcaacgtgtcgttactgcg
tggatgctcacccaaggtttcaccgtcggcatcagtgatattattgtggcagatgaaacg
gcaaagaagatttcagaagttttacaagctagacaggaggcggtgaaagagcttttcaaa
aaagcttgttctggtaatttcgagacgcaaccaggcaaaggcctgttgcgttctttcgaa
gccgtgtcgaacagcgaattcaattcagctagagaaattgcaggaaaatacgccaccgat
ttcctatctaactcaaacaacatttatagaatggttatgtctggttccaagggtagtatg
attaacatatcgcaaatcatggcttgtgtcggtcaacaaaatgtagaaggtaaaagaatc
ccatttggattcaacgctagaactttacctcatttcgccaaattcgactttaacgctgat
agcagaggttttgttaagaattcatatttaagtggtttgttaccacatgagttgtttttt
cacgccatgggtggaagagaaggaatcattgatacagcctgtaaaacatctgaaaccggt
tacatacaacgacgtttagtaaaggctatggaagatgttgctgtggcatatgatggaact
gttagaaattctaacaatgaaattattcagttcttttacggtgaagatggaatcagaggt
gagtttattgagcaacaagacttgatactaatgacaatgaattatgaaaaactgaaaaaa
cgattctttcacgatatttatgatgaaaactacggaaaaggctggttagaaccttctatc
gctcaagagattataagccgagttcatactgaaattttagatcgagaatatcagttttta
ttagattcacagagaatgcttcaaactgaaattttccccgatggtgaatacaaacaatat
ttgcctgtcaagtttgaaagatttattaatattgcgaagaaaaaattccttcaagaaact
atttgtactgtagatcctcgcgacttggttcgtcaaatagaccaacttgtcgatgacttg
cagccagtacgctatgcagataatattgtattggagagcgttcgttgttccatggtgctt
ttcgttattcaactcagaacctatttaaacagtttggaattattgcgctaccataaattt
agtcaagaagctctgacatggatattcgattcaattaaaaatacgtacagaacctcattg
atacaggcaggagaggttgtcggttgtttggctgcgcagtctattggcgagccagcaacg
cagatgaccttaaatacattccacttcgccggagttggagcgaaaaatgttacattaggt
attcctcgactcagagaactattgaacgtcgcaattaatattgctactcctagtttgact
gtatatctagattccgaaacggctaaaaattcggagtttgttcgaaaattacaaggagaa
attgagtttactacacttgaaaagtttattaagaaaatagagttggtttttgacccagaa
attatgagcagttgcatacccgaagataatgaatgggtagaagattactattcgctaaac
gaaatgaacgaatcttccgctagcagcatgagcgtttgggttttgcggttaacattacag
caaagacttattacggaagggttacggttaagcgaaattggagaaaaaataaaaaaactt
ctagctcatttgcagatgtcagttatttggactgatgataacagtgatcaatttatcatc
agaataagagcttctaaaaactccgccaaactactcgatttacactctacgttaaataca
gcagaagtaggcagtgaagagacaattgatttgttaacctatttaatggaaacgactctg
ccttccatacgtttacgaggtataccgggaatcaaaaaagtatatattcgagaagaacga
gctgtgaaatataaccccgacaagggagtttatgaaccatgcaatggtggatggattctc
gatactgacggtgttaacctggccagtgtgtttacgcttgaacacgtagatttcacgcgc
acgataagtaacaacatttctgaagttctaaaaatactaggaattgaagctgcacgggct
gctttgctgaaggaaatccgtcaagtcatttctttcgatggttcatatgtcaactaccga
catctcgctattctatgtgacgttatgactcatagaggaaccttagtgcctattaataga
cacggtattaacagagtcaacaaaggattgtttgcaaagtcttcattcgaagaaactgtt
gaaatattctcagacgcagctatgtttggcgaaatggacacactgaatggactcactgaa
aatataattttcggtcagcttgcgaactttggtaccggtatgagcgatatcatgattgat
tacgccaagcttaaaaacgcaaacacatatttcgagtcttattctggtgctgaatgggct
aaattgaacaatactgtggagaacaacgatatttcgaagttacgttttaaactttttggt
ctttag
DBGET
integrated database retrieval system