Dryobates pubescens (Downy woodpecker): 104300926
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Entry
104300926 CDS
T08526
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104300926 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104300926 (POLR1B)
Enzymes [BR:
dpub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104300926 (POLR1B)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104300926 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
104300926
NCBI-ProteinID:
XP_009899555
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MPMEMALKDSRLSLAIVGVSICPPAVPAGTVCQERRVFPAECRGLRSTYRGRVTVDISWS
LNDIPQGTIKHALGYVPIMVKSKLCNLYNLSPQDLVQHHEEEEEMGGYFIINGLEKVIRM
LIMPRRNFPLAVTRPKWKNRGPGFTEYGLMMHCVKDEHTATNMNLHYLENGYVMVNFFFQ
KELFFIPLGFALKALVDFPDYQIFEELIKGKEGDTFYMNSITEMMRAVLDAGCFTQQNVL
EYLGKSFRVKLNLPEWYSNEQAAEFILNKCICIHLTNRTEKFYLLCMMTRKLYALAKGEC
MEDNPDSLMNQEVLTPGQLFLMFLKERLESWLQSVKFVLDKKTEKTDVRINEDSLVKAFS
LTADFSRPFEYLLATGNLRTKTGMGMLQSSGLCVVGDKLNFIRYLSHFRCVHRGAAFAQM
RTTTVRKLLPESWGFLCPVDTPDGEPCGLMNHLTAVCEIVTEVVPVIDIPPLLCSLGVNP
IDGTPSKPYSECYRVVLDGSVVGWVEEELAPEIAETLRRFKITQEKRFPARAEVVLIPMT
GKPSLYPGLFIFTTPCRMVRPVRNLLYGRNEWIGTLEQIFMNVATMESEVVPGVSTHQEL
FPHSILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPL
VRPSMYDYYGMDSYPIGTNAIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKMESIDL
ALKASRAGDNLVFGIRPGDPNLTEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVNY
PNKEVGIVDNIRLCSNDRGTGKFKKVCITVRVPRNPTVGDKFASRHGQKGILSQLWPAED
MPFTENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGGAYDATPFTFTEKNSALKY
FGETLASAGYNYFGTEKMYSGISGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDTL
TNQPIKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYICTSCASITSPVL
EKPPHSTSLTSNRRYSCSVCKEVDRIEAVPVPHVFRYFVAELAAMNIKTKLKVE
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggagatggcgctgaaggacagccggctgtcgctggctatagtgggggtgtcc
atctgccctcccgccgtgccggcggggacggtgtgccaggagaggagggtctttcccgcc
gagtgccgcggcctgcgcagcacctaccgcggcagggtcacggttgacatcagctggtca
ctgaatgacattccccaagggactattaagcatgccttggggtatgttccaatcatggtg
aagtccaagttgtgcaacctttataatctttctccacaagacctcgtacagcaccatgag
gaggaagaggaaatgggaggctacttcattattaatggcttagaaaaagttattaggatg
ctgattatgcccaggcgaaatttccctcttgcagtgacaagacccaaatggaaaaacaga
ggccctggtttcacagagtatggactaatgatgcactgtgttaaggatgagcacactgca
acaaacatgaacctgcactacttggagaatggttatgtcatggtcaacttcttttttcag
aaagagttgttcttcattcccttgggatttgccctgaaggcattggttgatttcccagac
tatcagatttttgaagagctgatcaaaggaaaagaaggtgacaccttctacatgaacagc
attactgagatgatgagagcagtcttggatgcaggctgctttacacagcaaaatgtcctg
gaatacctcggcaagagcttcagagtgaagcttaaccttcctgagtggtacagcaacgag
caggcagcagaattcattttgaacaagtgcatctgcatacacctgacaaacagaactgag
aagttctacctgctgtgtatgatgacccggaagctgtatgccctggccaaaggggagtgc
atggaggataatccagacagtttgatgaatcaagaagtgctgaccccaggacagcttttc
cttatgttcttaaaggagaggcttgaaagctggttgcaatctgttaagtttgttttggac
aaaaaaacagaaaaaacagatgtcagaataaatgaagacagcttggtgaaggccttcagc
ctgacagcagacttttccaggccgtttgaatatcttcttgcaactggtaacctgcgaact
aaaacaggcatgggcatgttgcagagcagtggtctgtgtgtggtgggggacaagctgaac
ttcattcgctacctctcccacttccgctgcgtgcacagaggcgcggcctttgcccagatg
agaaccaccactgtccgcaagctgctgcccgaatcctggggcttcctctgccctgtggac
accccagatggagagccctgcggcctgatgaaccacttgacagcagtgtgtgagatagtg
acggaggtggtgcctgtgatagacatcccacctctcttatgttccttaggtgtcaacccc
attgatggaactccaagcaagccttactcagagtgttacagggttgtgttggatggctct
gtggtgggctgggtagaggaggagctggctcctgagattgcagaaacccttcgccgtttc
aagatcacacaagagaagagattccctgcacgggcagaggtggtcctcatcccaatgaca
ggaaagcccagcctgtaccctgggctgttcattttcactaccccttgccggatggtgcgg
cctgtcaggaacctcttgtacggaaggaatgagtggattggtactctggaacagatcttc
atgaacgtggccacaatggagtcagaggtggtgcctggagtgagcactcaccaggagctc
ttccctcacagcattctgagtgtggtggccaacctcatccccttctctgaccacaaccaa
agtccacgaaacatgtaccagtgccagatgggaaagcaaaccatggggtttccagtgtat
aactacaaggaccgttcagataacaaactctaccaccttcataccccccagagccctctg
gtgcggcccagcatgtatgactattatggtatggacagctatcccatcggcaccaatgcg
attgtggctgtcatatcctacagcggctatgacatggaagatgcaatgattgtgaacaaa
tcttcctggcagagagggtttgcctatggaagtgttatcaagatggagagcattgacctt
gccctgaaagctagcagggcaggagataatttagtgtttggcatcaggcctggggatcct
aatcttacagagaagctggatgcagatgggctgccttttgttggctccatcctacagcct
ggagaccccttctacagctttatgaacctcaacacaggggagaccttcactgtgaactat
ccgaacaaagaggttggcatcgtggacaacatcaggctgtgcagcaacgaccgcggcacc
ggcaagttcaagaaggtctgcatcaccgtcagggttcccaggaacccaaccgtgggagac
aagtttgccagccgccacgggcagaaaggtatcctgagccagctgtggccagctgaggac
atgcccttcacggagaacgggatggttcctgacatcctcttcaaccctcacggcttcccc
tcgcgcatgaccattgggatgctgatcgagagcatggccggcaagtcggcggcgctgcac
ggcggcgcctacgatgccacccccttcaccttcactgagaaaaactctgccctgaagtac
tttggggagaccttggcaagcgcgggctacaactacttcgggacggagaagatgtacagc
ggcatcagcggcctggagctggaggcggacatcttcgtgggggtggtctactaccagcgc
ctgcgccacatggtctccgacaagttccaggtgaggacgacggggcccagggacactctc
accaaccagcccatcaaagggaggaacgtggaaggcgggatccgcttcggcgagatggag
cgcgacgccctgctggcccacgggacctccttcctgctgcaggaccgcctcttcaactgc
tccgacggctccgtagcctacatctgcaccagctgcgccagcatcacctctcccgtgctg
gagaaaccaccgcactctacctccctcaccagcaacaggaggtactcctgctctgtctgc
aaggaggtggacaggatcgaagctgtccctgtgccccacgtcttccggtacttcgtggca
gagctggccgccatgaacattaaaacaaagctgaaggtggagtag
DBGET
integrated database retrieval system
