Dryobates pubescens (Downy woodpecker): 104301844
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Entry
104301844 CDS
T08526
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04020
Calcium signaling pathway
dpub04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104301844 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104301844 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104301844 (GRIN1)
Ion channels [BR:
dpub04040
]
Ligand-gated channels
Glutamate (ionotropic)
104301844 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
104301844
NCBI-ProteinID:
XP_009900583
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
LLLALLFSSSFAHAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQLNATSVT
HKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIGLTTRMS
IYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEE
KESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVIILSARQ
VVADVLCVLLARGLAALSMVELSGVIGLQLINGKNESAHISDAVAIVAQAVHDLFEKENI
TDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKL
VQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTCR
EEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGK
FGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK
KEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTL
SSAMWLLISGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN
DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHA
FIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDL
DKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQM
QLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTQYHPTDIT
GQLNLSDPSVSTVV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
ctgctgctcgccctgctcttctcctcctccttcgcccacgccggctgcgaccccaagatc
gtcaacatcggcgcggtgctgagcaccaagaaacacgagcagatcttccgtgaggcggtg
aaccaggccaacaagcggcacggcacatggaagctccagctcaacgccacctcggtcacg
cacaagcccaacgccatccagatggctctctccgtttgcgaggacctcatctccagccag
gtctatgcaatcttagttagccaccctcctgctcccaacgaccacctcacaccaactcct
gtgtcatacacagctggcttctaccggatccctgtcattggtctgacaacacgcatgtct
atatactctgacaagagcatccatctgtccttcctgcgcacggtgcccccctactcccac
caggccaacgtctggttcgagatgatgagagtcttcaactggaaccacgtcatcctgatc
gtcagcgacgaccacgagggtcgtgctgcacagaagaagctggagaccctcctggaggag
aaagagtccaagagtaaaaaaaggaactatgaaaacctcgaccaactttcctatgacaac
aagcgaggacccaaggctgagaaagttctgcagtttgaccccggcaccaaaaacgtgacg
tcgctgctgctggaggctaaggagctggaggctcgagtcatcatcctctctgccaggcag
gtggtggctgatgtgctctgcgtgctgctggccaggggacttgcagccctgagcatggtg
gagctgtctggagtgatcggtttgcagctcatcaacggcaagaacgagtccgcccacatc
agcgacgcggtggccatcgtggcccaggccgtgcacgacctctttgagaaggagaacatc
accgaccccccgcggggctgcgtgggcaacaccaacatctggaaaacaggacccctcttc
aagagggtgctgatgtcctccaagtactccgagggtgtcacgggacgggtggagttcaac
gaggatggggacaggaagtttgccaactacagcatcatgaacctgcagaacaggaagctg
gtccaagttgggatttacaacggcagccacgtcctgaccaacgacaggaagattatctgg
ccgggaggagagacggagaagcctcaaggctatcagatgtcaaccaagctgaagattgtg
acgatccaccaggagccctttgtgtacgtgaagcccacccaagccgacgggacctgcagg
gaggaattcaccatcaatggagaccctgtgaaaaaggtgttctgcaccgggcccaacgag
accatcccaggccgtcccaccgtggcactgtgctgctatggcttctgcattgacctgctg
atccggctggcaggggtgatgaacttcacctacgaggttcacctggtggctgatggtaaa
tttggtacccaagagcgggtgaacaacagcaacaagaaggagtggaacgggatgatgggc
gagctgctgagcggccaggccgacatgatcgtggcgcccctcaccatcaacaacgagcgg
gcacagtacattgagttctccaagcccttcaagtaccagggcctcaccatcctcgtcaag
aaggaaatcccccgcagcaccctggactccttcatgcagcctttccagagcacgctctgg
ctgctggtggggctgtctgtgcacgtggtggcagtgatgctgtacctcctagaccgattc
agcccgtttggccggttcaaagtaaacagtgaggaggaggaggaagatgccctgaccctc
tcctcagccatgtggctcctgatctctggcattggagaaggtgctccccggagtttctct
gcccgtatccttggcatggtgtgggctggctttgctatgatcattgtggcttcctacact
gccaacctggcagccttcctggtgctggaccggcccgaggagaggatcactggcatcaat
gacccccggcttcgcaacccctctgataagttcatctacgccacggtgaagcagagctcg
gtggacatctacttccgacggcaggtggagctgagcaccatgtaccggcacatggagaag
cacaactacgagagcgccgccgaggccatccaggcagtcagggacaacaagctccacgcc
ttcatctgggactcggcggtgctggagttcgaagcctcccagaagtgcgacctggtgacc
acgggggagctgttcttccgctccggcttcggcatcggcatgcgcaaggacagcccctgg
aagcagaacgtctccctggccatcctcaagtcccacgagaacggcttcatggaggatttg
gacaagacttgggtgaggtatcaggagtgtgactcccgtagcaatgccccagcaacactc
acctttgagaacatggcaggtgtgtttatgctggtggctggaggtattgtggccgggata
tttttaatattcatagagatagcttacaaaaggcataaggacgcgcggaggaagcagatg
cagctggcgtttgcggccgttaatgtgtggaggaaaaacctgcaggatagaaaaagtggt
agagcagaacctgaccctaaaaagaaagccacttttaggtccatcacctccaccctggcc
tccagcttcaagagacgtaggtcctccaaggatacgcagtaccaccccaccgacatcacc
ggccagctcaacctctccgacccctcggtcagcactgtggtgtga
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