Dryobates pubescens (Downy woodpecker): 104305125
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Entry
104305125 CDS
T08526
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04510
Focal adhesion
dpub04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104305125
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104305125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Crescentin
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
104305125
NCBI-ProteinID:
XP_009904248
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MDLLAFALLLVAGSWQEPNLSHGCSHGSCYPATGNLLVGRASRLSATSTCGMDRPQEYCI
VSHLQDSEKCFTCDSRDPSLPESHRIENVIYLTGPQGQRTWWQSENGVEYVSIRLDLEGE
FHFTHLIMKFKTFRPAAMLVERSSDFGRSWKVYRYFAYNCSKLFPYVPVQPLGLVDEVLC
DQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPEIQDLLRVTNLRVNLTKLHTLGDNLLDT
RQEVLHKYYYAVDELVLRGSCFCHGHAAHCAPAPGAPTSSIPGMIHGRCVCEHHTEGLNC
ERCQDFYHDLPWRPAEGSNANACRRCDCNEHSQQCHFDMAVFLATGNTSGAVCDGCQHNT
MGRRCHLCKPFYYRHPRSDIRAPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQCRCK
ENVAGPRCDRCRHGAYGLSHGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVAGRS
CSQCVPEFWGLSYDVGGCRPCACDFGGAYNNRCSMEDGACSCRPHLMGRQCDQVQPGFFC
APLDYYTYEAEQATGHSHGNPQLPGAIRPEVPQDCLEYDTGEPGEQKGRPQHQRSPFHAP
QPRAPSRRIRQQPPKPDVEEVLRDGTGRMVTWTGSGFARVRDGAGLTFRVDNVPYPMDYE
LLLRAXGEHAEDWEAVVSVSSQVLPTSPRCGNLLPSEQMYREILPHSQRYVLLSRPFCFE
PSTPYTVTVRLQRAGVTQRHPSAFILIDSLVLLPQVLELPGFHEAEAAARREELERYRCL
EAFRMAPPHTLAQACTRLVCSVSALLHGRALPCQCDLQGSRSSECQVQGGQCDCKPHVHG
RRCDHCAPSSYGFGPLGCSPCACSPEGSMSQLCDAVSGQCQCRPGVVGRQCDQCQPGHWG
FPACLPCQCNGHAEECDPQTGSCLHCRDHTTGRHCERCQDGYYGDPVLGSGQQCRPCPCP
GYPGTRHYHGSACHADEETHHIVCLCAPGYAGPRCDRCSPGCFGAAAMEGGVCRPCQCNN
NIDTSDPGACDPQTGQCLRCLYHTSGPRCAHCQPGYYGNALQRSCRRCGCDPQGTLASHC
TAGTCTCDRGTGACACRPNVVGKNCDRCIPHFWRLGGPGGCEPCGCHPTHALNPACDVVS
GQCQCRPGFGGRVCSQCLEHHWGDPEQECRACDCEPLGAESPQCDQASGQCWCRPGFGGL
RCDRCQRGYQEAFPHCSPCHPCFGRWDPALGSMQDVLRRLGAQVRTLREGGSAPQLNPRR
LRALEEALGHVEQLLGEQVSPGGPLLDGLPVRLDGTRMELDDFWKQLQELEQHLDQLAQV
DVRHLELLTXMGDLNRTASHLQTLLSTVAAAGFGESYRGILTSVEGSRQAAAVAGGTAGE
LSRSQATRRAAERVLRRQGNAFRRGTAAEQKSLREVQKRVMGLSVARINEKICGAPGDWS
CEQAPCGGALCRNNAGARHCGGTGCTGALPISARALGNARNASQHLEVALGKLGVVAQKT
QEVQELARGARSQAEEALGHSQAARSRVEKATTQLRDFIRRIKAFLAEEGADPGSIELVA
RQVLNISLPSSPGRIQELLQEMRESIGQLEGVDAVLKSTAQGLAAARGLLAQGQDARERA
EGVRDELAGTQQALEMAQTQATAAGNALRSARDAIRAAENRAKEAERRLKALEGKESRVQ
RRLQELAQRITTLEEQGRDTRRVAQQAKDRVQHATATSGTLTQDLAEVTQRYVVLKTRVS
GLDGVSGGALQRVTRLTAEAQDLLDKASNSKRKLEELEQHFGANERTMAAKAMRLQALEQ
RVWGLLEEIQEKANAYATC
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggacctcctggcattcgctctcctcctggtggcagggagctggcaggagcccaacctc
agccatggctgctcccatggcagctgctacccagccactgggaacctgctggtggggcgt
gcctcccgcctgagtgccacctccacctgcgggatggataggccccaggagtactgcatc
gtcagccacctccaggactcagagaaatgcttcacctgtgactcgcgggacccatccctg
cctgagagccaccgcatcgagaacgtcatctacctcaccggcccccaaggccagcggacc
tggtggcagtcagagaatggtgttgagtatgtcagcatccgtctggacctggagggcgag
ttccacttcactcaccttatcatgaagtttaagaccttccgccctgcggccatgctggtg
gagcgctcctctgacttcgggcgcagctggaaggtctaccgctactttgcctacaactgc
tccaagctcttcccctacgtccccgtccagcccttggggctggtggatgaggtgctgtgt
gaccagcggtactccgagatcgagccctccagccatggggaggtgatcttcaaggtgctg
gacccctccatcccagtggcagatccctacagcccggaaatccaggacctgctgcgtgtc
accaacctgcgggtgaacctcaccaagctgcatactctgggggacaacctgctggacaca
cggcaggaggtgctgcacaaatactactacgctgtggatgagctggtgctacgtgggagc
tgcttctgccatggccatgctgcccactgtgccccagcacctggcgccccaacatcctcc
atccctggcatgatccatgggcgctgcgtctgtgagcatcacacagagggactgaactgc
gagcgctgccaggacttctatcatgacctgccctggcgtccggccgagggctccaacgcc
aacgcctgccgccgctgtgactgcaatgagcactctcagcagtgccacttcgacatggct
gtctttctggccacggggaataccagtggggctgtgtgtgatggctgccagcacaatacc
atgggccgccgctgccacctctgcaagcccttctactaccggcacccccgctccgacatc
cgtgccccaaccgcctgcgccccctgtgactgtgatccagctggttcactggacggaggt
gcctgtgatgggcacacagatgtggcactgggcatgattgcagggcagtgccgctgcaag
gagaacgtggccggtccccgctgtgaccgctgccggcatggtgcttacggcctcagccac
ggcgacccacagggctgtcagccatgtaggtgtgacccacggggcacagtggcaggcagc
tccccctgtgaccccatcagcggggactgctactgcaaacgctttgtggccgggcgctcc
tgcagtcagtgcgtgcctgagttctggggcctgagctatgatgtggggggctgtcggccc
tgtgcctgtgacttcgggggagcctacaacaaccggtgttccatggaggatggggcttgt
tcctgtcgtccccacctcatgggacggcagtgtgaccaggtacaacctggcttcttctgt
gcccccctcgactactacacctatgaggctgagcaggccaccggccacagccatggcaac
ccccagctcccgggtgccatacgtcctgaggtgccccaggactgcctggagtatgacact
ggggagccaggggaacagaagggacgcccgcagcaccagcgcagcccctttcatgcccct
cagccccgtgctccctcacgccgcatccgccagcagccccccaagccggatgtggaggag
gtgttgcgggatggcactgggcgcatggtgacgtggacgggctcagggtttgcccgggtg
cgggacggggctggcctgaccttccgcgtggacaacgtgccctacccaatggactacgag
ctgctgctacgagcctgaggtgagcacgctgaggactgggaggctgtggtcagtgtcagc
tcccaggtgctgcccaccagccctcgctgcgggaacctgctgccctctgagcagatgtac
cgtgagatcctgccccacagtcagagatacgtgctgctgtcacggcccttctgctttgag
cccagcaccccctacacggtgacagtgaggcttcaacgagctggtgtcacccagcgccac
cccagtgccttcatcctcattgactcgttggtgctcctgccacaggtgctggagctccca
ggcttccatgaagcagaagcagcagcacgccgggaggagctggagcgttaccggtgcctg
gaggcatttcgcatggcccctccacacaccctggcccaggcctgcacacgcctggtctgc
agcgtgtcagccctgctgcatggcagggctctgccctgccagtgtgacctgcagggctcc
cgcagcagcgagtgccaggtgcagggcggacagtgcgactgcaagccccatgtgcatggc
cggcgctgcgaccactgtgctccaagcagctacggctttgggcccctgggctgcagcccc
tgcgcctgctccccagagggctcaatgtcacagctgtgtgatgcggtgagtgggcagtgc
cagtgccggcctggtgttgtgggccgacagtgtgaccagtgtcagcctggccactggggc
ttccctgcctgtctgccctgccagtgcaatgggcatgccgaggagtgcgacccccagaca
ggcagctgcctgcactgccgtgaccacaccactggccgacactgtgagaggtgccaggat
ggctactatggggacccagtgctaggctcggggcagcagtgccggccctgcccctgccct
ggctaccctggcacacggcactaccatggaagtgcctgccatgccgatgaagagacccac
cacatcgtctgcctctgtgcacccggatatgctgggccccgctgtgaccgctgctctcct
ggctgctttggggcagcagccatggagggaggtgtgtgccggccctgccagtgcaacaat
aacatcgacaccagcgacccaggggcctgtgacccccagacggggcagtgcctgcgctgc
ctgtaccacaccagtgggccccgctgtgcccactgccagcctggctattatggcaatgcc
ttgcagcgcagctgccggcgctgtggctgtgacccacaaggaaccctggcctcccactgc
actgctggcacctgcacttgtgaccgtggcacaggtgcctgtgcctgccggcccaatgtg
gtgggcaagaactgcgaccgctgcatacctcacttctggagacttgggggaccagggggc
tgtgagccctgtggctgccaccccacccatgctctgaaccctgcctgtgacgtggtgtca
gggcagtgccaatgcaggcctggctttgggggacgtgtctgctcccagtgcctggagcat
cactggggagaccctgaacaggagtgccgagcctgtgactgcgagccactgggtgctgag
agcccacagtgtgatcaggccagtggccagtgctggtgccggccaggctttggggggctg
cgctgtgaccgctgtcagcgtggctaccaggaggccttcccacactgctctccctgccac
ccctgctttgggcgctgggacccagccctgggcagcatgcaggatgtgctgcggcgtctt
ggggctcaggtgcggacactgagggagggagggtctgcaccccagctcaacccccgccgc
ctgcgggcactggaggaggccctggggcatgtggagcagctgctgggagagcaggtcagc
cctggaggccccctccttgatgggctacccgtgaggctggatggcaccaggatggaactg
gatgacttctggaagcagcttcaagagctggagcaacatctcgatcagttggcacaggtg
gatgtgaggcacctggagctgctcactnaaatgggagatctcaaccgaactgcctcccac
ctccaaaccctcctcagcactgtagcagcagctggattcggtgagtcttaccgtggcatc
ctgacatcagtggagggctcgcggcaggcagcggcggtggccggcggcacagccggtgag
ctgagcaggtcccaggcgacacggcgggcagccgagcgggtgctgcgccggcagggcaat
gccttccggcgtggcacggctgcggaacagaaatccttgcgggaggtgcagaaacgcgtg
atggggctcagtgttgccaggatcaatgagaagatttgtggggcacctggggactggagc
tgtgagcaagcaccttgcggaggagccctgtgccggaacaatgcaggggcacggcactgt
ggtggcacagggtgcacaggggcactgcccatctcagctcgagctctgggcaatgcccgc
aatgcctcgcagcatctggaggtggcattggggaagcttggtgttgtggcacagaagaca
caggaggtgcaggagctggcacgaggggcacggagccaggcagaggaagcactggggcac
tcgcaggctgcccgcagccgtgtggagaaggcaacgactcagcttcgggacttcatccgc
cggatcaaagccttcctggcagaggagggagctgacccaggcagcattgagctggtggcc
cggcaggtgctgaacatctccctgcccagcagccccggacggatccaggagctgctgcag
gagatgcgggagagcattggtcaactggagggagtggatgcagtgctcaaaagcacggca
caggggctggctgcagccagggggctgctggcacaggggcaggatgccagggaacgagca
gaaggtgtgagggatgagctggccgggacacaacaggcactggagatggcacagacacag
gcaacggcggcagggaacgccttacggagtgccagagatgccattcgggcagctgagaac
agagccaaggaggcggaacgcaggctgaaggcgctggaggggaaggagtcacgagtgcag
cggcggctgcaggagctggcacagcgtatcaccaccctggaggagcagggccgggacact
cgccgtgtggcccagcaagccaaagacagggtgcaacatgccactgccacctctgggaca
ctcactcaggacctcgcggaggtgacacagcgctatgtggtgctgaagacacgggtgagt
gggctggatggggtgtctggtggggccctgcagcgtgtgacgcggctgacagcagaggcc
caggacctcttggacaaggccagcaacagcaagaggaagttggaagagctggagcagcac
tttggggccaatgagcgaacgatggcagcaaaggcaatgcgactgcaggcgttggagcag
cgggtctgggggctgctggaggagatccaggagaaggccaatgcttatgccacgtgctag
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integrated database retrieval system
