Dryobates pubescens (Downy woodpecker): 104307765
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Entry
104307765 CDS
T08526
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04010
MAPK signaling pathway
dpub04210
Apoptosis
dpub04218
Cellular senescence
dpub04620
Toll-like receptor signaling pathway
dpub04621
NOD-like receptor signaling pathway
dpub04622
RIG-I-like receptor signaling pathway
dpub04623
Cytosolic DNA-sensing pathway
dpub04625
C-type lectin receptor signaling pathway
dpub04920
Adipocytokine signaling pathway
dpub05132
Salmonella infection
dpub05164
Influenza A
dpub05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104307765 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104307765 (NFKB1)
04218 Cellular senescence
104307765 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104307765 (NFKB1)
04621 NOD-like receptor signaling pathway
104307765 (NFKB1)
04622 RIG-I-like receptor signaling pathway
104307765 (NFKB1)
04623 Cytosolic DNA-sensing pathway
104307765 (NFKB1)
04625 C-type lectin receptor signaling pathway
104307765 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
104307765 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104307765 (NFKB1)
05168 Herpes simplex virus 1 infection
104307765 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
104307765 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpub03000
]
104307765 (NFKB1)
Transcription factors [BR:
dpub03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
104307765 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
TPR_12
Motif
Other DBs
NCBI-GeneID:
104307765
NCBI-ProteinID:
XP_009907157
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MAGEDSYIMGVPDPQMFAMDQLIGMNTLFNNTSYIPSDIPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLEARMIDACKRGYNPGLLVHPEL
TYLQADGCGDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGAGGGGMYGAGGGGAGSGFSYPSYGYSAFGGMHFHPG
TTKSNAGMKHGLSNSTAEQDGKSSNQQGDKCNMKHDVKVETMERRECRSSGDNEEKENAA
SSCKTEVNEADCRWQNGLFLQKAMQLAKRHCNALFDYAVTGDVKMLLAVQRHLTVVQDDN
GDNVLHLAIIHLHSELVKNLLEVMPDLNYNDIINMRNDLYQTPLHLAVITKQAVVVQDLL
KAGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHKKISPMINLFNGEGLCAVHMVVMAN
SLSCLKQLIAAGVNINAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDDDEGIVPGTTPLDMAANCEVY
DILSGKPYESTVAVEELLTQGRLRDLNEGYKMQLYKLLELPDPNRNWSTLAQKLGLGILN
NAFSLSPSPSKTLLDNYEVSGGTVGELLAALRQMDHTEAIEILQKALSLSQGPTRPEDSA
AEALLSSSPSLTFANGETGKLCNSKFQDSDSVCDSGVETSFRKLSFTYSDSLSSKSAVTL
SKVTLGYGQESSVQSS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagactcctatattatgggtgtgcctgatccccaaatgtttgcaatggat
cagctcataggaatgaacacattatttaataacacaagttacatcccttcagacatacca
ctacgaacagcagatggaccatatcttcaaatcatagagcagccaaaacagagagggttt
cgcttccgatatgtatgcgaaggaccttcacatggtggacttcctggagcctctagtgaa
aagaacaaaaaatcataccctcaggtcaaaatctgcaattatgttggacctgcaaaagta
attgtccagttagttaccaatgggaaatacgtccacttgcacgctcacagcctggtgggt
aaattttgtgaagatggagtatgcacagttaatgcaggacccaaagatatggttgtaggg
tttgcaaatcttggaatccttcatgtcacgaagaagaaagtgtttgaaactctggaagca
cgcatgatagatgcttgcaaaaggggatacaacccagggctcctggtgcatcctgagctc
acctatctgcaggcagatggatgtggagacagacagctgactgagcgagagagggaaatc
attcgccaggcagccatacagcagaccaaggagatggatctcagtgtggtgcgcctcatg
ttcacggccttcctcccggacagcaacggcagcttcacgcggaaactcgaccccgtcata
tcagatgcgatctatgacagcaaagctcccaacgcctccaacctgaaaatcgtaagaatg
gacagaacagcagggtgtgtaacaggaggggaagagatttaccttctctgtgacaaagtt
cagaaagatgatattcaaatacgtttctatgaggaggatgagaatggaggcatgtgggaa
ggctttggagacttttctcctacagatgtacatagacagtttgccatcgtgttcaaaacc
cccaagtaccgagatgtcaatatcacgaagccagcctctgtgtttgtacagctgcgccgc
aaatccgatctagaaaccagcgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcaaaggaaacgccagaagctcatgcccaacttctctgatggctatgga
ggaggcagtggtgcaggaggcggtggcatgtatggagcaggaggtggtggtgctggctct
gggttcagttatccttcgtatggatactcagcttttggagggatgcatttccaccctggc
acaacaaagtccaatgctggaatgaaacatgggctatcaaatagcacagctgaacaagat
gggaagagctctaatcaacaaggtgacaaatgcaacatgaagcatgatgtgaaagtggaa
actatggagagaagggagtgcagaagctctggagataatgaggagaaggagaatgctgct
tcttcatgtaaaactgaagtaaatgaagcagattgcaggtggcagaatggtctgttcctg
cagaaggccatgcagcttgccaagcgccactgcaatgccctctttgattatgctgtaact
ggagatgtgaagatgctgttggctgttcagcgccatctcactgtggtccaggatgataac
ggagacaatgtccttcatttagcaattatccaccttcattccgagctggtgaagaacctc
ttggaagtgatgcccgatttgaattacaatgacatcattaacatgagaaatgacctctac
cagacccccttgcacctggcagtgatcacaaagcaggcagtggtggtacaggacctgctg
aaggctggagcagatgtcagcctgctggatcgccacggtaattctgtcttacacttagct
gctactgaaggagatgacaagattttgagtctgcttctcaagcataagaagatatctcct
atgatcaaccttttcaatggtgaaggtctctgtgcagttcacatggtggtgatggcaaac
agcctgtcctgcctcaaacagctgatcgctgccggtgttaacatcaatgctcaggaacag
aaatctggacgaactgcattgcatttagctgtggaacaagagaacatccctttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacatatgatgggacaactcca
cttcacatagcagctggaaggggctctacaaaattggcagcagttctcaaagcagcaggt
gcaaatcctcacattgagaactttgagccattgtttgatctggatgatgtgaaagatgat
gatgaagggattgtgcctggaacaacacccctggacatggcagctaactgtgaggtgtat
gacatactcagtggcaaaccctatgagtcaacggtggctgtggaggagttactgacacaa
ggacgcttgagagatcttaacgaaggttacaagatgcagctttacaagctcttggaattg
cctgatccaaacagaaactggtccactctggcacaaaaactgggtcttggcatactgaat
aatgccttcagcctaagcccttccccatcaaaaaccctgctagacaactacgaggtttct
ggtggcacagttggagagctgctggctgctttgagacagatggatcacacagaagccatc
gaaatccttcagaaagcactgtccctctcacaaggcccaactcgcccggaggacagcgcc
gcagaagctcttctctcgtcatcaccatcgctcacctttgcaaatggagagacaggcaag
ctctgcaacagcaaatttcaagacagtgacagcgtgtgtgacagtggcgtggagacctcc
ttccgcaaactgagctttacttactcagactctctgagcagcaagtcagcagtgacactt
agcaaagtgaccctgggctatggacaggaaagctcagtgcaaagcagttag
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