Daphnia pulex (common water flea): DAPPUDRAFT_108104
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Entry
DAPPUDRAFT_108104 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DAPPUDRAFT_108104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_108104
Enzymes [BR:
dpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
DAPPUDRAFT_108104
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
DAPPUDRAFT_108104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
ATP_bind_1
AAA_10
AAA_22
nSTAND3
AAA_16
TniB
AAA_24
CbiA
MMR_HSR1
AAA_14
AAA_35
Motif
Other DBs
NCBI-ProteinID:
EFX75275
JGI:
Dappu1_108104
UniProt:
E9GZ64
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MGRHTNFVIVIKRMQRNIENEGINENEGGVFLEITLIWQGSGHLVPKNSRTHFFNHLVPV
RDGGTRWHLAVENSTGWYEVAGISSGWYELAGRSFRLVRDDWQKFPAGTRWPAEISILEG
AKGERRAGCPDEVRLEERLAGNIPIHQLHVIRPQSLYIPDQELKSGLAEVFGTEIVKGKV
YSFGGGSKIAVFTWQGCLLELRGKTEAAYVARETPMIIYLNTHAGLEQIRKKADADKTKR
GPIAMIIGPTDVGKSTVCKLLLNYAVRMGRRPIYVDLDVGQGQLSIPCTIGAMAIERPAD
VEEGFSQVCPLIYHYGYKELGVM
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggggagacacacgaacttcgttatcgtaataaaaagaatgcagcggaatatcgaaaac
gaaggcataaacgaaaacgaagggggcgtttttctggaaataacgttgatctggcagggt
tccggacatctcgtacccaaaaattctcgtactcattttttcaaccatctcgtaccagta
cgagatggtggtacgaggtggcatctggcggtagagaacagtaccggctggtacgaggtg
gctggcatatcttccggctggtacgagttggctggcagaagtttccggctggtacgagat
gactggcagaaatttccggctggtacgagatggccggcagaaatctccattctagaggga
gccaaaggggagcgccgagctggatgtccggatgaagtccgccttgaagagcgcctagcc
ggcaacatcccaatccatcagcttcatgttatacggcctcaaagcttgtatataccagac
caggagttgaaatctggactggcagaagtatttggaacagaaattgtcaaaggaaaagtg
tacagttttggtggtggttccaagatcgctgttttcacatggcaaggttgtcttttagaa
ctgagagggaaaacagaagcggcttatgtggcaagagaaactccaatgattatttatctc
aatacacatgctggattagaacagataaggaagaaagctgatgctgacaagactaaaaga
ggccctatagccatgatcattggtccaacagatgttggaaaatcaacagtttgcaagttg
cttttgaactatgcagtgagaatgggtagaaggcctatatatgttgatttagatgttggc
cagggacaactttccattccatgcactattggtgcaatggcaattgaacgtcctgctgat
gttgaagaaggattttcccaagtatgcccactaatataccactatgggtacaaagaactg
ggagtaatgtaa
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