Daphnia pulex (common water flea): DAPPUDRAFT_119123
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Entry
DAPPUDRAFT_119123 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DAPPUDRAFT_119123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_119123
Enzymes [BR:
dpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
DAPPUDRAFT_119123
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
DAPPUDRAFT_119123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clp1
CLP1_P
Prok-RING_1
ASH2L-like_WH
Herpesvir_UL11
PHD
Motif
Other DBs
NCBI-ProteinID:
EFX63542
JGI:
Dappu1_119123
UniProt:
E9HXI9
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MDCLTCKTAFKKGDQKLACAKCAKWEHRRCHSWISKADYQFQKEMGFICSLCRLRDTPSP
FKDVSSASKNTDQSRPKRKINKPTPFTPSPARKRANRRAPHNKATKLPVRETLPTPTPES
RQHPNPSANQLHVIRPQSLYIPDQEIKTEKMLARSRKGFITLDCTTCSFLDCLFSLVNSL
AASSLKIWSRCQFSFGTILSCQKPFYSDLLEEKYLEQKLSKEKFTVLVVVPRSLFSHGKM
LARDNFPFQALLVQWQLNVRPADVEEGFSQVCPLIYHYGYKEPGMNGQGYQMLIHAAKAF
EVDLIIVLDQERLYNELVRDLPETVKVVFQPKSGGMPPRTTISYWYEMVEKMSTRIFGYE
MSGTRISTQKWRSCGTESACKSRISRSENSRIFLRIQFYPHSFELRFSDVKIFKIGAPAL
PDSLMPLGMKAEDQLTKLVTVQPSQQLLHHLISISMTESGEDNIIQTNVNGFICVNNVDL
ERQMLTVLSPQPRPLPRTRLLLSDIQYMDSH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggattgccttacttgtaaaactgcctttaaaaaaggagatcaaaaattggcttgtgcc
aaatgtgccaaatgggaacaccgacgttgtcactcttggatcagcaaggctgactatcaa
tttcaaaaggaaatgggttttatttgttctctttgccgattaagagatacaccgtctccc
ttcaaggacgtttcttcggcatcaaaaaacactgatcaatctcgacccaagagaaaaatc
aacaaacctactccattcacgccatcaccagcacggaagagagctaaccggagagcaccc
cataataaagcaacaaaattgcctgttcgtgaaaccctgccaactcctacgccagaaagc
aggcaacatcccaatccatcagctaatcagcttcatgttatacggcctcaaagcttgtac
ataccagaccaggagataaagactgagaaaatgctagccagaagcagaaaaggctttatt
acccttgattgtacaacatgctctttcttggattgtttgttttcattagttaactcgttg
gctgcctccagtctaaaaatttggtctcgttgccaatttagttttggcaccatactttcc
tgccagaagccattctatagtgatctgttggaggagaagtatttggaacagaaattgtca
aaggaaaagtttacagttttggtggtggttccaagatcgctgttttcacatggcaagatg
ttggccagggacaactttccattccaggcactattggtgcaatggcaattgaacgtccgg
cctgctgatgttgaagaaggattttcccaagtatgcccactaatataccactatgggtac
aaagaacctgggatgaatggccaagggtatcaaatgcttattcacgcagccaaagcgttt
gaagttgatctaataatcgtccttgaccaagagcgactttacaacgaactagtgcgtgat
ttacctgaaaccgtgaaagttgtatttcaacccaaaagtggcggaatgccacctcgtacc
accatctcgtactggtacgagatggttgaaaaaatgagtacgagaatttttgggtacgag
atgtccggaacccgtatttcaacccaaaagtggcggagttgtggaacggagtcggcttgc
aagagtagaatctcgagatcagaaaattcgcgaatatttctacggatccagttttatcca
cactcatttgaattgagattttcagatgttaaaatatttaaaattggtgcgccggcctta
ccagattcattaatgcctctcggaatgaaagcagaagatcaacttacgaaattagtcact
gttcagccaagccagcaattattgcatcatttgatttcaattagtatgactgaatccggg
gaagataatattattcagaccaacgttaatgggtttatttgtgtgaataacgtggattta
gaacggcaaatgcttacggtgttgtcacctcagcctcgaccactacctcgaacccgattg
cttttatccgacattcagtatatggactcccactga
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