KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_231106
Entry
DAPPUDRAFT_231106 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03020  RNA polymerase
dpx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DAPPUDRAFT_231106
  09124 Replication and repair
   03420 Nucleotide excision repair
    DAPPUDRAFT_231106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpx03021]
    DAPPUDRAFT_231106
   03400 DNA repair and recombination proteins [BR:dpx03400]
    DAPPUDRAFT_231106
Transcription machinery [BR:dpx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DAPPUDRAFT_231106
  RNA polymerase III system
   RNA polymerase III
     DAPPUDRAFT_231106
  RNA polymerase I system
   RNA polymerase I
     DAPPUDRAFT_231106
DNA repair and recombination proteins [BR:dpx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DAPPUDRAFT_231106
SSDB
Motif
Pfam: DNA_RNApol_7kD A2L_zn_ribbon HypA DZR_2 zinc_ribbon_13 Cytochrome_C7 DUF5816 MCM_OB DUF2252
Other DBs
NCBI-ProteinID: EFX77901
JGI: Dappu1_231106
UniProt: E9GRK0
LinkDB
Position
Unknown
AA seq 56 aa
MDKEGEPVKKQPMVYICGDCHGENELKPRDPIRCRECGYRIMYKKRTKRLIVFDAR
NT seq 171 nt   +upstreamnt  +downstreamnt
atggacaaagaaggagagcctgtaaaaaagcaaccaatggtttatatttgtggagattgc
catggtgaaaatgagttgaagccaagggatccaattcgttgccgagaatgtggctaccga
atcatgtataagaaacgcacaaagagattgattgtttttgatgctcgctaa

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