KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_341239
Entry
DAPPUDRAFT_341239 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DAPPUDRAFT_341239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_341239
Enzymes [BR:dpx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     DAPPUDRAFT_341239
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     DAPPUDRAFT_341239
SSDB
Motif
Pfam: CLP1_P
Other DBs
NCBI-ProteinID: EFX60824
JGI: Dappu1_341239
UniProt: E9I5A6
LinkDB
Position
Unknown
AA seq 208 aa
MSEEQRQKEPIYVDLDVGQGQLSIPGTIGAMAIERPTDVEEGFSQVCPLIYHYGYKEPGS
NVMLYNLLVTKLAQTVAERMEANRQNAVSGVIINTCGWVKGQGYQMLIHAAKAFEVDLII
VLDQERLYNELVRDLPETVKVVFQPKSGGVTFICSIEIPNASHKQFLKTDCFLMGTEEGH
LMLLAVHVIVFIPLNDSMYRASKFILES
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcggaggagcaacgacaaaaagagcctatatatgttgatttagatgttggccaggga
caactttccattccaggcactattggtgcaatggcaattgaacgtcctactgatgttgaa
gaagggttttcccaagtatgcccactaatataccactatgggtacaaagaacctgggagt
aatgtaatgctgtacaatttacttgtcaccaaattagcccaaacagttgcagagagaatg
gaagcaaatcgacagaatgctgttagtggagtaataatcaacacctgtggctgggtaaag
ggccaagggtatcaaatgcttattcacgcagccaaagcgtttgaagttgatctaataatc
gtccttgaccaagagcgactttacaacgaactagtgcgtgatttacctgaaaccgtgaaa
gttgtatttcaacccaaaagtggcggagtcactttcatttgtagcatagaaattccaaat
gcgagtcacaagcaatttttgaaaactgactgctttctaatgggcacagaagagggtcat
ttaatgttactggccgttcatgttattgtttttattcctctcaatgactccatgtacagg
gctagtaaatttatcctagagtcttga

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