Daphnia pulex (common water flea): DAPPUDRAFT_62003 Help Entry DAPPUDRAFT_62003  CDS       T04347                                  Name (GenBank) hypothetical protein   KO K03018   DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] Organism dpx  Daphnia pulex (common water flea) Pathway dpx03020   RNA polymerase Brite KEGG Orthology (KO) [BR:dpx00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     DAPPUDRAFT_62003  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dpx03021]     DAPPUDRAFT_62003 Enzymes [BR:dpx01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      DAPPUDRAFT_62003 Transcription machinery [BR:dpx03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      DAPPUDRAFT_62003 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Motif Other DBs NCBI-ProteinID:  EFX69638 JGI:  Dappu1_62003 UniProt:  E9HF69 LinkDB All DBs Position Unknown AA seq 1238 aa AA seqDB search ELCKEVKRCPHCDELNGVVKKCGMLKISHEKFRNAKKPIIEAELVAYDNAVQFNKEIEPM LSSALIKMLNPIEVMHLFERIPDEDVQYILMNSEHGHPKDMILTRLPVPPACIRPSVMSD LKSGTNEDDLTMKLTEIVFLNDVIVKHRLSGAKSQIILEDWYFLQFQCALYINSELSGIP FDMQPKKPSRGLVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDQVGVPEMVAKI LTYPTLVNEANIELMRKLVRNGPDIHPGAIFLKKKVSKLTISLKHGNRETLARNLKRGDV IERHMMDEDIVLFNRQPSLHKLSIMCHRAKILPHRTFRFNECVCTPYNADFDGDEMTLHF PQTEEARAEALILMTNKSNLVTPRNGELLIAAIQDFITGAYLLTLKDAFFDRAKTCQMVA SMLAGDEVNMVIKLPPPCIQKPAALWSGKQIFSLILRPNPGDRIKVNLRTKGKEYSKKNE EFCVNDGFLLVRNSEVLAGCVDKSTIGSGSKINIFYVLLRDYGEDFAIQAMWKLCRVASY YMMNRGFSIGIGDVTPGKTLLKEKQKLLDSGFSKCDEYIRLLSIGQLPCLPGCKKEESLE SKITKELSGIRDQAGEVCKKKLHPSNSPLVMSKSGSKGSYINISQMIACVGQQALNGKRV PNGFEDRSLPHFKRHSKIPAAKGFVSNSFYSGLSPTEFFFLAMSGREGLVDTAVTTAEPM YMQRRLIKFLEDLCCQYDSTVRNSAGEIIQFVYGGDGLDPTYMEAKDRPVDFHRGFEHVK AAFSFPDEEPLDDIELQQAFNTIMDTDSFKMLGVDFQHELRVFVESQVKRIKKVRQLFKM EGRSLLTVEKHLERITVGQLVEFCDFSKEKYERAKIEPGTAVGALCAQSIGEPGTQMTLK TFHFAGVASMNITQGVPRIKEIINASKAISTPVISTQLLKDDDPEYARRVKGRIEKTTLG EVTEYFEEVYLPSGCFVKIKLDMNRIRLLKLEVDASSIQSSLCTGKLKLNPDTVLVLNEK VIAVQCKETSKISLYGVMHHFKKELPTVIIKGFDDVSRVIIKMDDSRNTPRYSLLVEGNN MREVMATYGIQGSSTTSNNILEVFSTLGIEAAKATIAKEIQSTMESHGMSVDRRHVALLS DLMSCRGEILGITRHGLAKMKSSVLMLASFERTSDHLFDAAYYGQEDEVSGVSERIIMGV PMGIGTGSFKLLYKTGKSVQPKTRPLIFDVPEYHVPMV NT seq 3717 nt NT seq  +upstreamnt  +downstreamnt gaactgtgcaaagaagtaaaaaggtgcccccattgtgatgaactcaatggcgtggtaaag aagtgtggaatgttgaagatatcccatgaaaaatttcgaaatgccaaaaaacccatcatt gaagcagaattagttgcctacgataatgctgtgcagttcaacaaagagattgaaccaatg ttgtcatctgccttgatcaaaatgctaaatccaattgaggtaatgcacctctttgagaga attccagacgaagacgttcagtacatactcatgaattctgaacatgggcacccaaaggac atgattctcactcgtcttccagtccctcctgcttgcattcgaccttctgtaatgtctgat ttaaaatcggggacaaacgaggatgatttgacaatgaaactaacagaaattgtcttcctg aatgatgtcattgtcaaacaccgtctatcgggtgcaaaaagccaaattattctagaagac tggtactttttgcagtttcaatgtgcactttacatcaacagtgaattatccggaattcct tttgatatgcaacccaaaaagccatctcgcggtctagttcaacgcctaaaagggaaacaa ggacggtttcgtggaaatctttcggggaagcgtgtcgatttctccggaagaacagtcatt tcgcctgacccgaatttgcggattgatcaagttggcgttccagaaatggttgcgaaaatt ctgacttaccctacacttgttaatgaagccaatatcgaattaatgagaaaattggtaaga aacggaccagacatccatcctggcgcaatttttctaaagaaaaaagtttcaaaattgaca atatccctgaagcacggaaatcgcgaaacccttgctcgaaacctgaagcgcggcgatgtg attgaaaggcatatgatggacgaagatatcgtcttgttcaaccgtcagccgtcgttacat aaactttccattatgtgtcaccgagccaagattttgccgcaccgcactttccgctttaat gagtgcgtctgtacaccctacaatgctgattttgacggtgacgaaatgactcttcatttt ccacaaactgaagaagctcgcgccgaagccttgatcttaatgacaaataaatctaatttg gtgactccgcgtaacggcgaattattgatagcagctattcaggatttcataactggagct tatttactgacattaaaggatgctttcttcgatcgagccaagacttgccaaatggttgca tccatgcttgcaggtgacgaggtgaacatggtcattaaacttcctcctccttgtatccaa aagcccgcagccctatggtcaggaaaacagattttcagtttgattcttcgtcctaatcct ggagatcgcattaaagttaacctgagaaccaaaggaaaagagtattcaaagaagaacgaa gagttttgcgtcaatgacgggtttctgttggtccgtaattctgaggtgttagcaggatgc gttgacaaatctaccattggatctggttcaaaaatcaacattttttacgttcttcttcgc gactatggagaggatttcgctattcaggcaatgtggaaactttgtcgggtagcttcttat tatatgatgaaccggggattctctatcggcattggtgatgttactcctggtaaaactttg ctgaaagaaaagcaaaaactcttggactctgggttttcgaagtgcgacgaatacattcgt ttactcagtatcggtcaattaccttgccttccgggatgcaaaaaagaggaatccttggaa tcgaaaatcactaaagaactttctggaattcgtgaccaggccggagaagtgtgcaaaaag aagctgcatccgagtaacagcccattggtcatgtcaaaaagtggctcaaagggatcatac atcaacatttctcagatgattgcctgcgtaggacaacaagctttaaacggcaaacgagtg cccaatggttttgaagaccgtagtttgcctcactttaagcgacattcgaaaatcccggct gccaaagggtttgtctccaacagcttttactccggactttcccccacagaatttttcttc ctcgctatgagtgggcgtgaaggattggtagatacagccgtcacaacagctgaacccatg tacatgcaacggcgactaataaaattcttggaagacctttgttgccaatacgattcgact gtgaggaactccgccggtgagattattcagttcgtttatggaggtgatgggctggatcct acctacatggaagccaaagatcgcccggttgatttccacagaggattcgagcatgtcaaa gccgctttctcttttccggatgaagaacctttggatgatattgaactacaacaagctttc aacacaataatggacacggattcttttaaaatgcttggagtcgactttcaacatgagctc cgggtttttgttgagagccaagtgaaacggataaaaaaagtacggcagcttttcaaaatg gaagggcgatctttacttacagtagaaaaacacctggagcgcataactgttggtcagtta gtggaattctgcgacttttctaaggaaaagtatgaacgggctaaaattgagccaggtacc gccgttggagcactttgcgcccagagtattggagaaccgggtactcaaatgacgctcaag acatttcattttgctggtgttgcttccatgaacattacacagggagttcctaggattaag gaaattattaatgcttcaaaagcaatcagtacgccagtcatttctactcagcttttaaaa gatgatgacccggagtatgctcgacgagtaaaaggaaggattgaaaagaccacactggga gaagtaacagaatatttcgaggaagtctatttaccctctggatgtttcgtgaagattaaa ttggacatgaataggatccgattgcttaaattagaagttgacgcaagttccattcaatcg agcctgtgcactggcaagctcaaattaaatcccgacaccgttctagtcctcaacgaaaaa gtcattgctgttcagtgtaaagaaacctcgaaaatatcgttgtatggcgttatgcatcat ttcaaaaaagaattgccgacagtcatcatcaaaggtttcgatgatgtctctcgagttata ataaagatggacgattcgaggaatacaccacgttacagcctacttgttgaaggtaacaac atgcgggaagtgatggcgacttacggtattcaagggtcatcaactacatcaaacaatatt ctggaagtcttcagtaccttgggaattgaagctgcaaaggcaactattgccaaggaaatt caatccacaatggaaagccacggcatgagtgtcgatcgccggcacgttgctcttctttca gatttgatgagttgtcgtggtgaaatcttgggaatcacgagacacggattggcaaagatg aaatcctctgttcttatgttggcctcgttcgaacgaacctctgatcatttgtttgatgca gcatactacggacaagaagatgaggtttcgggagtaagcgaacgcatcatcatgggggtt cctatggggatcgggacaggatcttttaaattgctgtacaaaacaggaaagtcggttcag ccgaaaacaaggccacttatttttgacgttccagaatatcacgtccctatggtatag

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