KEGG   Diaphorobacter nitroreducens: BA022_00405
Entry
BA022_00405       CDS       T04937                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dpy  Diaphorobacter nitroreducens
Pathway
dpy03030  DNA replication
dpy03410  Base excision repair
dpy03420  Nucleotide excision repair
dpy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dpy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BA022_00405
   03410 Base excision repair
    BA022_00405
   03420 Nucleotide excision repair
    BA022_00405
   03440 Homologous recombination
    BA022_00405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpy03032]
    BA022_00405
   03400 DNA repair and recombination proteins [BR:dpy03400]
    BA022_00405
Enzymes [BR:dpy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BA022_00405
DNA replication proteins [BR:dpy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BA022_00405
DNA repair and recombination proteins [BR:dpy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BA022_00405
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BA022_00405
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2
Other DBs
NCBI-ProteinID: ASI67170
UniProt: A0A2Z2LB98
LinkDB
Position
83657..86425
AA seq 922 aa
MTRPKTLVLVDGSSYLYRAFHAMPDLRAVPGDPASAPTGAIRGMINMLQALKKEVPADYA
ACVFDASGPTFRDALYPEYKQHRAPMPDDLRAQIEPIHEVVRLLGWPVLCIPGVEADDVI
GTLAATAAGQGMQVVISSGDKDLSQLVNEHITIIDTMNGKKRDVAGVTAEFGVPPTLMVD
YQALVGDAVDNVPGVPKVGPKTAAKWLTEYGSLDALVANAGAIKGVAGENLRGALDWLPT
ARTLVTIKTDCDLAGHLDGLPAIDAIAVGAEQADALRDFYQKYGFKSLARALPSAVVPDA
GASGDLFTTPDASAVAVQAQRREVTYDTILTWEQLDGWLARLKAAPLAALDTETTSLDEL
RAEIVGVSFSVEPGAAAYIPLAHNGPDAPPQLPLAEVLERLRPWLEDPACRKLGQHVKYD
RHVFANHGIQVRGYAHDTMLQSYVLEVHKPHGLTSLAERHTGRTGISYEDLCGKGAKQIP
FAQVPVDKAAAYSCEDSDQTLDVHRVLWPQLQTDDKLRGIYELEMACSETLFRIERNGVL
IDAGKLAAQSHALGQRILQLEQEAYAIAGQPFNLGSPKQLGEIFFDKLGMPVVKKTATGA
RSTDEEVLEKLAEDYPLPAKLLEHRSLCKLKGTYTDKLSTLADPRTGRVHTHYAQAVAVT
GRLSSNEPNLQNIPIRTPEGRRVREAFVAPTGRVIASADYSQIELRIMAHISGDEALLHA
FREGLDVHRATAAEVFGVALDQVSSEQRRYAKVINFGLIYGMSSFGLAKNLGIETKAAAA
YIDRYFQRYPGVKQYMEETKAQAKARGYVETVFGRRLYLPEINSPNGPRRGAAERAAINA
PMQGTAADLIKKAMVAVQGELDARKPEVLMIMQVHDELVFELPEGEVDWLRREIPRLMAG
VAALQVPLLAEVGVGPDWDKAH
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgacacgccccaagaccctggtgctggtggatggctccagctacctgtaccgcgcattc
catgccatgcccgacctgcgcgccgtgccgggcgatcccgccagcgcccccacgggggcc
atccgcggcatgatcaacatgctgcaggcgctcaagaaagaagtcccggccgactacgcc
gcctgcgttttcgatgccagcggccccacttttcgcgatgcgctgtaccccgagtacaag
cagcaccgcgcgcccatgcccgatgacctgcgtgcgcagatcgagcccatccacgaggtg
gtgcggctgctgggctggccggtgctgtgtatccccggcgtggaggccgacgacgtgatc
ggcacgctggctgctaccgcggccggccagggcatgcaggtggtgatttccagcggcgac
aaggacctgagccagctggtgaacgaacacatcaccatcatcgacaccatgaacggcaag
aagcgggacgtggccggcgtgaccgccgagttcggcgtgcccccgacgctcatggtggac
taccaggccctggtgggcgatgccgtggacaacgtgcccggcgtgcccaaggtcggcccc
aagaccgccgccaaatggctcacggaatacggttcgctggacgcgctggtggccaacgcg
ggcgccatcaagggcgtggccggcgagaacctgcgcggggcgctggactggctgcccacc
gcgcgcacgctggtcaccatcaagaccgactgcgacctggcgggccacctcgatggtctg
cctgctatcgatgcgatagctgttggcgctgagcaggcggacgcgttgcgcgatttttat
cagaagtacggcttcaagagcctggcacgcgcgctgccgtccgcggtggtgccggatgct
ggcgccagcggagacctcttcaccacgcccgacgccagcgccgtcgccgtgcaggcgcag
cggcgcgaggtgacctacgacaccatcctcacgtgggagcagctcgacggctggctcgcg
cgcctgaaggccgcgccgctggcggcgctggacaccgagaccacgtcgctggacgagttg
cgcgccgagatcgtgggcgtgtccttcagcgttgagcccggagccgccgcttacatcccg
ctggcgcacaacggccctgacgcgccgccgcagctgccgctggccgaggtgctggagcgc
ctgcgcccctggctggaagatccggcctgccgcaagctgggccagcacgtgaagtacgac
cggcatgtgttcgccaaccatggcatccaggtgcgcggctatgcgcacgacaccatgctg
caaagctacgtgctggaagtgcacaagccccacggcctgaccagcctggccgagcgccac
acgggccgcaccggcatcagctacgaagacctgtgcggcaagggggccaagcagatccca
tttgcccaggtcccggtggacaaggctgcggcgtactcgtgcgaggactccgaccagacg
ctggatgtgcaccgcgtgctatggccccagctgcagaccgacgacaagctgcgcggcatc
tacgaactggagatggcctgcagcgagaccttgtttcgcatcgagcgcaacggcgtgctg
atcgacgcgggcaagctggccgcccagagccacgcgctgggccagcgcatcctgcagctg
gagcaggaggcgtacgccatcgccggccagcccttcaacctgggatcgcccaagcaattg
ggtgaaatcttcttcgacaagctgggcatgcccgtggtgaagaagaccgccaccggcgcg
cgcagcaccgacgaagaggtgctggagaagctggccgaggactacccgctgcccgccaaa
ctgctggaacaccgcagcctgtgcaagctcaagggcacctacaccgacaagctcagcacg
ctggcggacccgcgcaccggccgcgtccacacccactacgcgcaggccgtggccgtcacc
gggcggctgtccagcaacgaacccaacctgcagaacatccccattcgcacgccggagggc
cggcgcgtgcgcgaggccttcgtggcacccacaggccgcgtgattgccagtgccgactac
agccagatcgagctgcgcatcatggcgcacatcagcggcgacgaggcgctgctgcacgcc
ttccgcgagggcctggacgtgcaccgcgccacggcggccgaggtgttcggcgtggcgctg
gaccaggtgagcagcgagcagcgccgctacgccaaggtcatcaactttggcctgatctac
ggcatgagcagtttcggcctggccaagaacctgggcatcgagaccaaggccgccgccgcc
tacatcgaccgctacttccagcgctaccccggcgtgaagcagtacatggaagagaccaag
gcccaggccaaggcgcgtggctacgtggagaccgtgttcggccggcgcctgtacctgccg
gagatcaactcgcccaacggcccgcgccgcggcgcggccgagcgcgccgccatcaacgca
cccatgcagggcacggcggccgacctcatcaagaaggccatggtggccgtgcagggcgag
ctggacgcgcgcaagcccgaggtgctcatgatcatgcaggtgcacgacgaactggtgttc
gagctgcccgagggcgaggtggactggctgcgccgtgagatcccgcgcctgatggccggc
gtggccgcgctgcaggtaccactgctggccgaagtgggcgtggggcccgactgggacaag
gcgcactga

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