Diaphorobacter nitroreducens: BA022_00405
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Entry
BA022_00405 CDS
T04937
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy03030
DNA replication
dpy03410
Base excision repair
dpy03420
Nucleotide excision repair
dpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BA022_00405
03410 Base excision repair
BA022_00405
03420 Nucleotide excision repair
BA022_00405
03440 Homologous recombination
BA022_00405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpy03032
]
BA022_00405
03400 DNA repair and recombination proteins [BR:
dpy03400
]
BA022_00405
Enzymes [BR:
dpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BA022_00405
DNA replication proteins [BR:
dpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BA022_00405
DNA repair and recombination proteins [BR:
dpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BA022_00405
NER (nucleotide excision repair)
GGR (global genome repair) factors
BA022_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASI67170
UniProt:
A0A2Z2LB98
LinkDB
All DBs
Position
83657..86425
Genome browser
AA seq
922 aa
AA seq
DB search
MTRPKTLVLVDGSSYLYRAFHAMPDLRAVPGDPASAPTGAIRGMINMLQALKKEVPADYA
ACVFDASGPTFRDALYPEYKQHRAPMPDDLRAQIEPIHEVVRLLGWPVLCIPGVEADDVI
GTLAATAAGQGMQVVISSGDKDLSQLVNEHITIIDTMNGKKRDVAGVTAEFGVPPTLMVD
YQALVGDAVDNVPGVPKVGPKTAAKWLTEYGSLDALVANAGAIKGVAGENLRGALDWLPT
ARTLVTIKTDCDLAGHLDGLPAIDAIAVGAEQADALRDFYQKYGFKSLARALPSAVVPDA
GASGDLFTTPDASAVAVQAQRREVTYDTILTWEQLDGWLARLKAAPLAALDTETTSLDEL
RAEIVGVSFSVEPGAAAYIPLAHNGPDAPPQLPLAEVLERLRPWLEDPACRKLGQHVKYD
RHVFANHGIQVRGYAHDTMLQSYVLEVHKPHGLTSLAERHTGRTGISYEDLCGKGAKQIP
FAQVPVDKAAAYSCEDSDQTLDVHRVLWPQLQTDDKLRGIYELEMACSETLFRIERNGVL
IDAGKLAAQSHALGQRILQLEQEAYAIAGQPFNLGSPKQLGEIFFDKLGMPVVKKTATGA
RSTDEEVLEKLAEDYPLPAKLLEHRSLCKLKGTYTDKLSTLADPRTGRVHTHYAQAVAVT
GRLSSNEPNLQNIPIRTPEGRRVREAFVAPTGRVIASADYSQIELRIMAHISGDEALLHA
FREGLDVHRATAAEVFGVALDQVSSEQRRYAKVINFGLIYGMSSFGLAKNLGIETKAAAA
YIDRYFQRYPGVKQYMEETKAQAKARGYVETVFGRRLYLPEINSPNGPRRGAAERAAINA
PMQGTAADLIKKAMVAVQGELDARKPEVLMIMQVHDELVFELPEGEVDWLRREIPRLMAG
VAALQVPLLAEVGVGPDWDKAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgacacgccccaagaccctggtgctggtggatggctccagctacctgtaccgcgcattc
catgccatgcccgacctgcgcgccgtgccgggcgatcccgccagcgcccccacgggggcc
atccgcggcatgatcaacatgctgcaggcgctcaagaaagaagtcccggccgactacgcc
gcctgcgttttcgatgccagcggccccacttttcgcgatgcgctgtaccccgagtacaag
cagcaccgcgcgcccatgcccgatgacctgcgtgcgcagatcgagcccatccacgaggtg
gtgcggctgctgggctggccggtgctgtgtatccccggcgtggaggccgacgacgtgatc
ggcacgctggctgctaccgcggccggccagggcatgcaggtggtgatttccagcggcgac
aaggacctgagccagctggtgaacgaacacatcaccatcatcgacaccatgaacggcaag
aagcgggacgtggccggcgtgaccgccgagttcggcgtgcccccgacgctcatggtggac
taccaggccctggtgggcgatgccgtggacaacgtgcccggcgtgcccaaggtcggcccc
aagaccgccgccaaatggctcacggaatacggttcgctggacgcgctggtggccaacgcg
ggcgccatcaagggcgtggccggcgagaacctgcgcggggcgctggactggctgcccacc
gcgcgcacgctggtcaccatcaagaccgactgcgacctggcgggccacctcgatggtctg
cctgctatcgatgcgatagctgttggcgctgagcaggcggacgcgttgcgcgatttttat
cagaagtacggcttcaagagcctggcacgcgcgctgccgtccgcggtggtgccggatgct
ggcgccagcggagacctcttcaccacgcccgacgccagcgccgtcgccgtgcaggcgcag
cggcgcgaggtgacctacgacaccatcctcacgtgggagcagctcgacggctggctcgcg
cgcctgaaggccgcgccgctggcggcgctggacaccgagaccacgtcgctggacgagttg
cgcgccgagatcgtgggcgtgtccttcagcgttgagcccggagccgccgcttacatcccg
ctggcgcacaacggccctgacgcgccgccgcagctgccgctggccgaggtgctggagcgc
ctgcgcccctggctggaagatccggcctgccgcaagctgggccagcacgtgaagtacgac
cggcatgtgttcgccaaccatggcatccaggtgcgcggctatgcgcacgacaccatgctg
caaagctacgtgctggaagtgcacaagccccacggcctgaccagcctggccgagcgccac
acgggccgcaccggcatcagctacgaagacctgtgcggcaagggggccaagcagatccca
tttgcccaggtcccggtggacaaggctgcggcgtactcgtgcgaggactccgaccagacg
ctggatgtgcaccgcgtgctatggccccagctgcagaccgacgacaagctgcgcggcatc
tacgaactggagatggcctgcagcgagaccttgtttcgcatcgagcgcaacggcgtgctg
atcgacgcgggcaagctggccgcccagagccacgcgctgggccagcgcatcctgcagctg
gagcaggaggcgtacgccatcgccggccagcccttcaacctgggatcgcccaagcaattg
ggtgaaatcttcttcgacaagctgggcatgcccgtggtgaagaagaccgccaccggcgcg
cgcagcaccgacgaagaggtgctggagaagctggccgaggactacccgctgcccgccaaa
ctgctggaacaccgcagcctgtgcaagctcaagggcacctacaccgacaagctcagcacg
ctggcggacccgcgcaccggccgcgtccacacccactacgcgcaggccgtggccgtcacc
gggcggctgtccagcaacgaacccaacctgcagaacatccccattcgcacgccggagggc
cggcgcgtgcgcgaggccttcgtggcacccacaggccgcgtgattgccagtgccgactac
agccagatcgagctgcgcatcatggcgcacatcagcggcgacgaggcgctgctgcacgcc
ttccgcgagggcctggacgtgcaccgcgccacggcggccgaggtgttcggcgtggcgctg
gaccaggtgagcagcgagcagcgccgctacgccaaggtcatcaactttggcctgatctac
ggcatgagcagtttcggcctggccaagaacctgggcatcgagaccaaggccgccgccgcc
tacatcgaccgctacttccagcgctaccccggcgtgaagcagtacatggaagagaccaag
gcccaggccaaggcgcgtggctacgtggagaccgtgttcggccggcgcctgtacctgccg
gagatcaactcgcccaacggcccgcgccgcggcgcggccgagcgcgccgccatcaacgca
cccatgcagggcacggcggccgacctcatcaagaaggccatggtggccgtgcagggcgag
ctggacgcgcgcaagcccgaggtgctcatgatcatgcaggtgcacgacgaactggtgttc
gagctgcccgagggcgaggtggactggctgcgccgtgagatcccgcgcctgatggccggc
gtggccgcgctgcaggtaccactgctggccgaagtgggcgtggggcccgactgggacaag
gcgcactga
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