Daphnia pulicaria: 124310852
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Entry
124310852 CDS
T08670
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124310852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124310852
Enzymes [BR:
dpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124310852
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124310852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2703
PUB
Motif
Other DBs
NCBI-GeneID:
124310852
NCBI-ProteinID:
XP_046630891
EnsemblRapid:
LOC124310852
LinkDB
All DBs
Position
8:11010238..11015673
Genome browser
AA seq
1387 aa
AA seq
DB search
MVKEQYRETDVIRKIARVSFGIESPQQIQQQSHIQVVAQNLYNRDAGRTPMQYGMLDRRM
GMSVKDAICGTCGKGLTECVGHFGYIDLELPVFHVGYFKAVITILQTICKSCSHVMLNEK
MRKIYRAKLKGSKIPYLNKKALRKQIQEVCKKVTRCPNCNDINGMVKKCGMLKISHEKFR
SIKKDNVILKNELVAYENAVQFNKEIETMLSSGLVKMLNPLEVLHLFERIPDEDIQFLVM
NPENGHPKDMILTRVPVPPVCIRPSVVSDLKSGTNEDDLTMKLTEIVFLNDVIVKHRLSG
AKSQMILEDWDFLQLQCALYINSELSGIPLNMQPKKPSRGLVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDQVGVPELVAKILTFPTRVNEANIDLMRKLVRNGADVHPGANY
LQEKGSELKKFLKYGNRESLARNLKLGDLIERHMMDEDIVLFNRQPSLHKLSIMCHRAKI
LPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEAWILMGNKYNLVTPRNGELLIA
AIQDFITGAYLLTLKDAFFDRAKTCQMVASMLAGDEVNMVIKLPPPCIQKPAALWSGKQI
FSLILRPNPGDRIKVNLRTKGKEYSKKNEEFCVNDGFLLVRNSEVLAGCVDKSTIGSGSK
INIFYVLLRDYGEDFAIQAMWKLCRVASYYMMNRGFSIGIGDVTPGKTLLKEKQTLLDTG
YSKCDEYIRLLTLGQLPCLPGCNEEESLESKILKELSGIRDQAGEVCKKELHPSNSPLVM
SKSGSKGSYINISQMIACVGQQALNGKRVPNGFEDRSLPHFKRHSKIPAAKGFVSNSFYS
GLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCCQYDSTVRNSTGEIIQF
VYGGDGLDPTYMEAKDRPVDFQRALDHIKAASPYPDEEPLDDIELQQAFNTIMDTDSFKM
LGVDFQHELRVFVESQVKRIKKVRQLFKMEGRSLLTVEKHLERITVGQLVEFCDFSKEKY
ERAKIEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASKAIST
PVISTQLLKDDDPEYARRVKGRIEKTTLGEVTEYFEEVYLPDDCFMLIKLDMNRIRLLKL
EVDANSIQWSLCTCKLKIKPSFIKVISETIVIVKPAPSSKSSMYHVMQHLKETLPRVVIK
GLPTVSRAVINIDDTRKPPRYYLLVEGDNMREVMATYGVKGTSTTSNNILEVYSTLGIEA
AKATIAKEIQYTMESHGMSVDRRHVALLSDLMSCRGEILGITRHGLAKMKESVLMLASFE
RTSDHLFDAAYYGQEDEITGVSECIIMGIPMSIGTGAFKLLYKTGKSVPPKTRPLIFDLP
EYHVPML
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcaataccgtgagactgacgttattagaaaaatagcaagagtaagcttt
ggaattgagagtccgcagcaaatacaacagcaatctcacattcaagtggtagctcagaat
ttgtataaccgagatgctggacgaacacctatgcagtatggaatgttggacagaagaatg
gggatgagtgttaaagatgcaatatgtggtacttgcggaaaagggctgacagaatgtgta
ggccattttggttacattgatttggaacttccagtattccatgttggatacttcaaggct
gtaattactatcttgcaaacaatttgcaaatcttgctctcatgtaatgcttaatgaaaag
atgagaaagatttacagagccaaactaaagggttcaaaaataccttatctaaataagaaa
gcactgaggaagcaaattcaagaagtatgcaaaaaagtaacacgctgcccaaactgcaat
gacatcaatggcatggtgaaaaagtgtggcatgctgaagatatcccatgaaaaatttaga
agtatcaagaaagacaacgttattttaaaaaatgagttagtggcttatgagaatgctgtg
cagttcaacaaggagattgaaacaatgttgtcatctggcttggtcaaaatgttaaatcca
cttgaagtacttcatctttttgagagaattccagacgaagatatccaatttttggtgatg
aatcctgaaaatgggcatccaaaggacatgattctcactcgtgttccagttcctcctgtt
tgcattcgaccttctgtagtgtccgatttgaaatcggggacaaacgaggatgatttgaca
atgaaactaacagaaattgtcttcctgaatgatgtcattgtcaaacaccgtctctcgggt
gcaaaaagccaaatgattctagaagactgggattttttgcagttacaatgtgcactttac
atcaacagtgaattatccggtatccctttgaacatgcaacccaaaaaaccatctcgtggt
ctagttcaacgcctaaagggaaaacaaggacggtttcgtggaaatctttcggggaagcgt
gtcgatttctccggaagaacagtcatttcgcctgaccccaatttgcggattgatcaagtt
ggcgttccggagttggttgcaaaaattctgactttccctactcgtgtcaatgaagcaaat
attgatctaatgagaaaattagtaagaaacggagcagacgtccatcctggcgccaattat
ctgcaagaaaaaggttcagaattgaaaaagtttctcaagtacgggaatcgcgaaagcctt
gctcgaaatctcaagcttggcgatttgattgaaaggcatatgatggatgaagatatcgtc
ttgttcaaccgtcagccgtcgttacataaactttccattatgtgccaccgagcaaagatt
ttgccgcaccgcactttccgcttcaatgaatgcgtctgtacaccctacaatgcggatttt
gacggtgacgagatgaatctccatcttccgcaaacagaagaagctcgcgctgaagcctgg
atcctaatgggaaataaatataatttagtgactccgcgtaacggcgaattattgatagca
gctattcaggatttcataactggagcttacttgctgacattaaaggatgcttttttcgat
cgagccaagacttgccaaatggttgcatccatgcttgcaggtgacgaggtaaacatggtc
attaaacttccgcctccgtgtatccaaaaacctgcagccctatggtcaggaaaacagatt
ttcagtttgattcttcgtcctaatcctggagatcgcattaaagttaacctgagaaccaaa
ggaaaagagtattcaaagaagaacgaagagttttgcgtcaatgacgggtttctgttggtc
cgtaattctgaggtgttagcaggatgcgttgacaaatctaccattggatctggttcaaaa
atcaacattttttacgtacttcttcgcgactacggagaggatttcgctattcaggcaatg
tggaaactttgccgagtagcttcttattatatgatgaaccgaggattctctatcggcatt
ggtgatgtaactcctggcaaaactttgctaaaggaaaaacaaacacttttggacactggt
tattccaagtgcgacgaatacattcgtttactcaccttaggtcaactgccttgccttcca
ggatgcaatgaagaagaatccttagaatcaaaaatcttgaaagaactgtctggaattcgt
gatcaggccggagaagtgtgcaaaaaggagctgcatccgagcaatagtccattggtcatg
tctaaaagtggttcaaaaggatcatacatcaacatttctcagatgattgcctgcgtagga
caacaagctttaaacggcaaacgagtgcccaatggttttgaagatcgaagtttgcctcat
ttcaagcgacattcgaaaatcccggcagctaaagggtttgtctccaacagcttttactcc
ggacttactcccacagaatttttcttccacacaatgggcgggcgtgaaggattggtggat
acagccgtaaaaacagctgaaacgggttatatgcaacggcgactagtaaaatcgttggaa
gacctttgttgccagtacgattcgactgtgagaaactccactggagagattattcaattc
gtttatggaggtgatgggctagatcctacttacatggaagccaaagatcgccccgttgat
ttccaacgagctcttgaccatatcaaagccgcttccccttatccggatgaagaacctttg
gatgatattgaactgcaacaagcattcaacacaattatggacacggattcttttaaaatg
cttggagttgactttcaacatgagctccgggtttttgttgagagccaagtcaaacggatc
aaaaaagtacggcagcttttcaaaatggaaggtcgatctttacttacagtagaaaaacac
ctggagcgcataactgttggtcagttagtggaattctgcgacttttctaaggaaaagtat
gaacgggctaaaattgagccaggtaccgccgttggagcactttgcgcccagagtattgga
gaaccgggtactcaaatgacgctcaagacatttcattttgctggtgttgcttccatgaac
atcacacagggagttcctaggattaaggaaattattaatgcttcaaaagccatcagtacg
ccagtcatttctactcagcttttaaaagatgatgaccctgagtatgctcgacgagtaaaa
ggaaggatagaaaagaccacactgggagaagtaacagaatatttcgaggaagtctactta
cccgatgattgtttcatgttgatcaaattggacatgaataggatccgattgcttaaatta
gaagtggacgcaaattcgattcagtggagcctctgcacatgtaagctgaaaataaagcct
agtttcattaaagtcataagtgaaaccatcgttatcgtcaaacctgctccatcttcgaaa
tcttcgatgtatcacgttatgcaacatctcaaggaaacgttacccagagtcgtcatcaag
ggtttgccaactgtcagtcgagctgtcatcaatatagacgacacaagaaaaccaccaaga
tattacctacttgttgaaggtgacaacatgcgggaagtgatggcgacctacggtgttaaa
gggacctcaactacatcaaacaatattctggaagtctacagtaccttgggaattgaagct
gcaaaggcgactattgctaaggaaatccaatacaccatggaaagccacggcatgagtgtc
gatcgccggcacgttgctcttctttcagatttgatgagttgccgtggtgaaattttgggc
atcacgagacatggattggcaaagatgaaagagtcggttctgatgttagcttcgttcgaa
aggacctcggatcatctatttgatgcagcatactacgggcaggaagatgagattacggga
gtaagcgaatgcatcatcatgggaataccaatgtcaatcgggactggggcttttaaattg
ctgtacaaaaccggaaagtcggttccacctaaaacaagaccacttatttttgatttacca
gaatatcatgtaccaatgctttaa
DBGET
integrated database retrieval system
