Daphnia pulicaria: 124312927
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Entry
124312927 CDS
T08670
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpz02000
]
124312927
Transporters [BR:
dpz02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124312927
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124312927
NCBI-ProteinID:
XP_046633453
EnsemblRapid:
LOC124312927
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Position
9:1234558..1243437
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AA seq
693 aa
AA seq
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MLPEKASASNGTVAVAVEGSGSQKRIQCGNSPSLSSTSPSAESLLKQQQQQPDKMAKETN
LSGKVSGLAAAADDQHEPILLNHHPDEQQDEDKAQIVFFLSETTAVSAGSHRPDAPNEDS
PALQERETWAKKAEFLLAVIGFAVDLGNVWRFPYICYKNGGGAFLIPYVVMMVFGGLPLF
YMELALGQFHRSGCLTLWKRICPALKGVGYAICIIDFYMGMYYNTIIGWAVYYFVASFTS
ELPWTSCDHPWNTNSCALVGPVDNGTFVRSPAQEYFERNVLENYRSDGMDDLGAIKWSLA
LCVFAVFVLVYFSLWKGVRSTGKAVWITAVAPYIVLIILLFRGASLPGAGDGIRYFLTPQ
WSKLAETKVWTDAASQVFFSLGPGFGTLLALSSYNKFHNNCFYDALLTSSINLATSLLAG
FVIFAVLGYMAEIRNVSIDQLGLEGPGLVFVVYPEAIATMAGSTFWSMIFFFLLITLGLD
STFGGLEAMITGLCDEYPVLLGRRRELFVGILLVFIYLCALPTTTYGGMYLVDLLNVYGP
GIAILFLVFVEAMGVSWCYGTQRFSDDIESMLGFQPGPFWKITWAYVSPIFILLIFICTL
IDPVPLDTQDYTYPAWSIKVGWVLTAIPLSCIPIYMIYKFIITKGTFVQRLVKMFTPEDT
SDPRNLSQMTLTARDAVAPSTVSHHSTSYGTQV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgctcccggagaaggcgagcgctagcaacgggacggtagcagtagcggtggagggcagc
ggcagccaaaagcggatccagtgcggaaatagcccctcgttgtcgtcgacgtcgccatcg
gctgagagtcttctgaaacagcagcagcagcagccggacaagatggcgaaagagaccaac
ctgtccggcaaggtttccggcttagcggcggcggccgacgatcagcacgaacccattcta
ctcaatcaccatcccgacgagcagcaggacgaagacaaggcgcaaatcgttttcttcctc
tcggagactacggcggtgagcgccggaagccaccggccggatgcgcccaacgaggactca
ccagccctgcaggaacgcgaaacctgggccaagaaagccgaattccttctggccgtcatt
ggctttgcggtcgatcttggcaacgtctggcgattcccttacatctgctacaaaaacgga
ggaggtgcgttcctcattccatatgtcgtcatgatggtctttggcggtctgccgctattc
tacatggagctggccctgggacagtttcaccgcagcggctgcctaactctctggaagcgc
atctgcccggccctgaaaggagtgggctacgccatttgcatcatcgatttctacatgggc
atgtactataataccatcatcggctgggccgtctactattttgtggcttcgttcacgtcc
gagttgccctggacgtcgtgcgaccacccgtggaacaccaacagttgcgcacttgtcgga
cccgtcgataacggcacgttcgtccgaagtcccgcccaggaatactttgagcggaacgtc
ttggagaattaccggtcggacgggatggacgatctcggagcaatcaaatggtcgctggcc
ctgtgcgtctttgccgtctttgtcctcgtctacttctcactgtggaagggagtccgatcg
actggcaaagccgtttggatcacggccgtcgctccttatattgtcctcatcatcctcctc
ttccgcggcgcatcgctgccaggcgccggtgatggcatccgctacttcctcacgccccag
tggagtaaactggctgaaacaaaggtttggaccgatgcggcgtcacaagtatttttctca
ctgggacctggtttcggcaccctattggccctctccagttacaacaagttccacaacaat
tgcttctatgacgccttgttgacgagctccatcaacttggccaccagcttactggccggc
tttgtcatcttcgccgtgctcggttacatggccgaaattagaaacgtttcgatcgatcaa
cttggactggaaggtcctggattagttttcgtcgtttatccggaagcaatagcgacgatg
gccggatcgacattttggtcgatgatattctttttcctattgattacgcttggattggat
agcacttttggtggattagaggccatgatcacgggactgtgcgatgagtatcccgtctta
ctgggccgccggagggaactatttgtcgggatattactcgttttcatctacctctgtgct
ctcccgaccacaacttatggtggaatgtatttggtcgatttattgaatgtctacggccct
ggcatagccatcctcttcttagtgtttgtggaggctatgggcgtgagctggtgttacggt
acccagaggttctccgacgacattgagtctatgctcggcttccaaccgggacccttttgg
aaaatcacttgggcttacgtcagccccatctttattctgctaattttcatctgcacattg
atcgatccggtcccgctggacacacaagattacacctacccggcttggtccatcaaagtc
ggttgggtactcacagccatcccgctgtcttgcatccccatttacatgatctacaaattt
atcatcaccaaaggaactttcgtgcagcgattggtgaaaatgtttacaccggaagacacg
agcgatcctcgaaacttgtcgcagatgactctgacggcccgcgatgccgtcgcgcccagc
accgtcagtcatcactccacttcctatggcactcaagtctga
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