Daphnia pulicaria: 124314577
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Entry
124314577 CDS
T08670
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124314577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124314577
Enzymes [BR:
dpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124314577
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124314577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
124314577
NCBI-ProteinID:
XP_046635729
EnsemblRapid:
LOC124314577
LinkDB
All DBs
Position
10:complement(4510992..4515837)
Genome browser
AA seq
1134 aa
AA seq
DB search
MGEASRDVCADLEKLLEPIKAVEEKWKLVPAFLKTKGLVKQHIDSYNYFINVDIKKIVKA
NEKVVSHADQTFYIKYLDIHVGKPDSIEDMNHSRLTTPHECRLRDMTYSAPVTVDIEYTR
GQQRIVRNGIPIGRMPIMLRSSNCTLAGISPAEMAKKNECPYDCGGYFIVRGNEKVILIQ
EQMSKNRMIVEQDRKGNMSCQVTSSTHGTKTRTNVVVNKGKYYLKQNSFQDDIPVAIVFK
AMGIVSDQEIVQMIGTDDRVMTSFAPSLEECVRASIFTQQQALGHLGNKLRQKRFFGGPK
KTATEEARETLATTILAHVPVENFNFKAKAMYLALMIRRVIQAENDPTSVDDRDYYGNKR
LELAGSLLSLLFEDLFKRMNFELKQIADKNIPKIKAAQFDVIKHIRTDHITNGLENAIAT
GNWTIKRFRMDRQGVTQMLCRLSYISGLGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEGCGLVKNLALMTHITTEAEEEPISRIAQNMGVEDINLFSGEEISDPSIYTVFL
NGNILGLVKDYLRLIRYFKLARRHGFINAFVSIYPHFQTRSVYISSDGGRLCRPYIIVRK
GKAALTDKHMQELADSFRTFEDFIHDGLIEYLDVNEENDSNIAVYESDINEETTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIACNQRNRIDTLLYNLVYPHKPMVK
TRTIELINFENLPAGQNAMVAVMSYSGFDIEDATVLNKASLDRGYGRCLVYKNAKCALKR
YNNQSSDRVNGPILDAASKKPIWKHDILDADGFAAVGQPVEPKQVLINKAMPTAPVVTVA
AGAPAAVPLPEYRDVPITYKGAIPSYVEKVMFSSNAEESHIIKIQLRQTRRPEIGDKFSS
RHGQKGVTALIAEQEDLPFTELGICPDVIMNPHGFPSRMTVGKLIELLAGKAGVLEGKFH
YGTAFGGSKVQDVSEELIKHGYNYQGKECMTSGTTGEQLSAYIYFGPVYYQKLKHMVMDK
MHARSRGPRAVLTRQPTEGRAREGGLRLGEMERDCLIAYGSSMLILERLMISSDAFDVDV
CNQCGLMGYFGWCHYCKSSVSVSSIRIPYACKLLFQELQAMNIVPRLKLDKYFD
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcgagcagggatgtgtgtgcggatttggaaaaactattggaaccaataaag
gctgttgaggaaaaatggaagcttgttccagcatttctcaagaccaaaggtcttgtaaaa
cagcacattgattcctacaactattttataaatgtagatattaagaagattgtgaaagcc
aatgaaaaagttgtaagtcatgctgaccaaaccttctacatcaaatatttggatattcat
gtggggaagccagactcgattgaagatatgaaccattctcggctgaccacaccacatgag
tgcagattgagagatatgacgtattcagcaccagttactgtggatattgaatataccaga
gggcaacaaaggattgttcgtaatggaattccaattgggaggatgcccatcatgctcagg
agctcaaattgcacactagctggtatttcacccgcggagatggcgaaaaagaatgaatgc
ccatatgattgtggaggatattttattgttcgcggaaatgaaaaagtaattttaattcaa
gagcaaatgtcaaaaaatcgcatgatcgtcgagcaggataggaaaggaaatatgtcttgt
caagtcaccagcagtacccatggaacgaagacgcgtaccaacgtcgttgttaacaaaggg
aaatactatctgaaacaaaatagtttccaagatgacataccggttgctatagtgtttaaa
gccatggggattgtgtctgatcaagaaatagtccaaatgatcggtactgatgatcgtgtg
atgacgtcattcgccccttcactagaagagtgcgttcgagcttccatcttcactcaacaa
caagctctaggacatctgggtaacaaattgcgccagaaacggttttttggaggtccgaag
aaaacagcaaccgaagaagccagggagacccttgctacgactattttagcccatgttcca
gtggaaaactttaatttcaaagcaaaggctatgtatctcgcattaatgattcgtcgagtt
attcaagctgaaaatgacccaacttctgttgatgatcgtgattattacggtaacaagcgt
ttggagttagccggttcacttctctccctactgttcgaggatttgtttaagcgaatgaat
tttgaattgaaacaaattgcggacaaaaacattccgaagattaaagcagctcagtttgat
gttatcaaacacatacggacagaccacataacaaatggattggaaaatgccatagccact
gggaattggaccatcaaacgttttcgcatggatcggcaaggtgttactcaaatgctctgt
cgattgtcgtatatttccggacttgggatgatgacacgtgtaaattctcagttcgaaaag
acgcgaaaggtgtcgggaccgcgttctttacaaccttctcaatggggtatgctttgcccg
tcagatactccagaaggggagggatgtgggctcgtgaaaaatctcgcacttatgacccat
atcacaactgaagccgaggaagaacccatcagccggatcgctcaaaatatgggtgtcgaa
gatattaaccttttcagtggcgaggaaattagtgacccaagcatctacacagttttcctt
aatggtaatattctcgggttggtcaaggactacctgcggttgatccggtatttcaaactg
gctcgacgccatggcttcatcaatgcattcgtgtcgatctacccgcatttccaaacgcgt
tccgtttatataagttccgatggcggtcgtttgtgccgaccttatataatcgtccgaaaa
gggaaagcagccctaaccgataaacacatgcaagaattggcagatagctttcgaaccttt
gaagacttcattcacgatggattgattgaatacttggacgtgaacgaggagaatgacagc
aacattgctgtatacgaatccgacatcaacgaagaaaccactcatcttgaaattgaaccg
tttaccttgctaggcgtatgcgctggattgatcccgtatccccatcacaaccaaagtccg
cgtaacacttatcaatgtgccatgggaaaacaagcaatgggaactattgcctgcaatcaa
cgaaatcgcattgatacgcttctctacaatttggtgtacccccacaagccaatggtcaaa
actcgaacgattgaactcattaactttgagaatctccctgctggacaaaacgctatggtt
gcagtgatgagctactcaggtttcgatattgaggacgctactgttttgaacaaagcatca
ttggatcgaggttatggacgctgtttggtttacaaaaatgctaaatgcgctttgaagcgg
tacaacaatcagagctctgatcgtgtaaatggtccaatacttgatgcagcatctaaaaag
cccatatggaagcacgacattctagatgcggatggtttcgcagcagtcggtcaacctgtt
gaacctaagcaggttttgatcaacaaagctatgcctacagctcccgtggtcactgtcgct
gctggagcgcctgcggctgttcctctgcccgaatatcgcgatgtccctatcacttataaa
ggggcaattccgtcatacgtggaaaaagtcatgttttcttccaatgcagaagaatcacac
ataataaaaatccagttacgacagactcgtcgtcctgagattggcgacaaattcagtagt
cgacatggacagaaaggagtcactgcacttattgctgaacaagaagatctaccatttacg
gagctaggaatttgccccgatgtcattatgaatccccacggatttccatcacgtatgacg
gtcggaaagctgattgaactgcttgcgggaaaggccggagttttggaaggcaaattccac
tacggcactgcgtttggagggtctaaggtgcaagatgttagtgaagaattgattaagcat
ggatacaactaccaaggcaaagagtgtatgacgtctggtacaacaggggaacaactgtct
gcttatatttatttcgggccggtatactatcaaaaattgaagcacatggtgatggataag
atgcacgcacgatcccgtggaccaagagctgtactcacacggcagccgacagaaggtcgg
gcccgtgaaggtggtttacgtcttggcgagatggaacgagattgccttatcgcatacgga
tccagcatgttgatcttggagcgattaatgatatctagtgacgcctttgatgtcgatgtt
tgcaaccagtgcggactgatgggctattttggttggtgccattattgcaagtcaagcgtc
tccgtctcttctatccgtattccctatgcttgtaaacttttatttcaggagcttcaggca
atgaacatagttccacgactcaaattggataagtactttgactga
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