Daphnia pulicaria: 124316699
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Entry
124316699 CDS
T08670
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124316699
Enzymes [BR:
dpz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
124316699
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124316699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
Viral_helicase1
AAA_33
AAA_22
NACHT
DUF815
RNA_helicase
AAA_14
AAA_25
Rad17
bpMoxR
AAA_18
TIP49
nSTAND3
AAA_7
AAA_28
Sigma54_activ_2
ATPase_2
ABC_tran
Mg_chelatase
Zeta_toxin
AAA_11
Adeno_IVa2
Motif
Other DBs
NCBI-GeneID:
124316699
NCBI-ProteinID:
XP_046638594
EnsemblRapid:
LOC124316699
LinkDB
All DBs
Position
12:138395..140931
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AA seq
704 aa
AA seq
DB search
MNTVVIGSEIGSQKCCLPIAKFVNLNCQVGCPVKVTTNKGTFICKLFPRTDLKSDAVVEN
TVQIYSERRKFLITHPVVTRDFSVSKLSPKPATSITVTIVTDSFESVNNLKQCKLPLLIK
SLLSNKIITPLSSITVGKYFSAGNVEKILVLETKPDGGALSVSAKTQVKIENIITDKWMK
IQERVQTTRMGGVDEAYNKLKELVVYPLQHPQVFAQLCAPRGILLHGPPGCGKSSIVQQL
CAENGLFLIPVTCSDLSSSDPGGSEEKLRNIFKESLSVSSPTVLFLDGVDSICPKRGGQT
HTNRLITCLTGLIDDVHTNRNLTIMAATNRLEDVDPSLRRPGRLDREVHLYAPNCHQREE
IIKAICEEIELYTDLEDVKQVAEMTPGYVGADLNLLCREALYLSLDRCQLTLKEWKAAIG
RVRPSAMRESTGSGEFRRVSWDEVGGLEEARMYIRRSVEWPLKHPEAFERLNVPRPKGVL
IYGPPGCGKSLLVRAAATSCTASFLSISAAELFSPFVGDSEKMVSDLFRRARQAVPAILF
LDELDAMVGGRTNANHGRTAQLGVVAALLQEMDGISSSQGVVVVGATNRPDKIDGALLRP
GRFDSLVHIPHPDETARLAVLQSLCRKMPLKEVDLSNLAERTELFSGADLESLTKEAALG
ALEEDLSAFEILQRHFEQALAKVPPSITLEQADFYRDYASGKRK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtcgttattggttcagagattggcagtcaaaagtgctgtcttcctattgcg
aagtttgtaaatttaaattgtcaagttgggtgcccagtaaaagtgacaacaaacaaggga
accttcatttgcaagctcttccctaggactgatttgaaaagtgatgcagttgttgaaaat
accgttcaaatttacagtgaacgtagaaagtttctcatcactcatccagtagtgacgagg
gatttcagtgtttccaaattgtcaccgaaaccggcaacaagtataactgtaactatcgta
actgatagttttgaaagtgtcaacaacttgaaacaatgcaagttgcccctgttgatcaag
agtcttctttcaaacaagatcatcaccccgctttcgtcaatcactgttggcaaatacttt
tccgcagggaatgtagagaaaatattggtcctggaaacgaagcctgacggtggagctctg
tcagtgtctgccaaaacccaagtcaagatcgaaaacatcatcacagacaagtggatgaaa
attcaagaacgagtccaaacgaccagaatgggaggagtagatgaagcctacaacaaattg
aaagaactggtggtgtatcccctacagcatcctcaagtgtttgctcaactctgcgcgcct
agaggaattcttttacacggtccaccgggctgcgggaaaagttcaatcgtccagcaactc
tgcgctgaaaacggcctgtttctcatcccagtcacttgctcggatctttcgtcatccgat
ccaggaggcagcgaagaaaaattgagaaacattttcaaggaaagtttaagcgtgtcgagt
cccacagttctatttctggacggtgtggattccatttgccctaaacgaggtggtcaaacc
cacacaaatcgtctgattacttgcctaacgggattgattgacgacgttcatactaaccgc
aacttgaccatcatggcggccaccaacaggttggaagacgtcgatccttcacttcgccgg
ccaggcagactggacagagaagtccatttgtatgcccccaattgccatcaacgggaagag
atcattaaagccatctgcgaagaaattgaattgtacacagacttggaagatgtgaaacaa
gttgctgaaatgacccccggctacgttggcgcagatttaaatcttttgtgccgcgaagcc
ctctatctttcattggatcgatgccaattgacactcaaagaatggaaggctgctattggt
cgtgttaggccatctgctatgagagaaagtaccggaagtggcgagttccgtcgagtcagc
tgggatgaagtcggaggattggaagaggcccgtatgtacatccgccgcagtgttgaatgg
ccactgaaacaccctgaagctttcgagaggctcaatgtgcctcgaccgaaaggagtttta
atttacggtcctccaggctgtggaaaatcgctcctggtcagagcggcggccacttcgtgc
acggcttccttcctgtccatttcagccgccgaactcttttctcctttcgtcggagactcg
gagaaaatggtctcggatctcttccggcgagcccggcaggcagttccggctatccttttc
ctggacgaattagacgcgatggttggtggacgtaccaacgccaatcacggccggacagct
caactgggtgtggtggcggcccttcttcaagaaatggacggcatttcatccagccaagga
gttgtggtagttggcgccaccaatcgacccgacaaaattgacggggctctacttcgtcct
ggccgtttcgactcgctggttcacatcccacacccggacgaaactgcacgattggccgtc
cttcagtcactctgccggaagatgccactgaaggaggtcgacctgagtaacttggcggaa
agaacggaactcttttcaggagccgatttagaatccctgaccaaagaggccgcactggga
gccctggaagaagatttatctgcctttgaaatcctccagcgacatttcgaacaagccctg
gccaaagtcccgccttctatcacgcttgaacaagccgatttctatcgggattacgcctct
ggtaagagaaaataa
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