KEGG   Daphnia pulicaria: 124342895
Entry
124342895         CDS       T08670                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
dpz  Daphnia pulicaria
Pathway
dpz03020  RNA polymerase
dpz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124342895
  09124 Replication and repair
   03420 Nucleotide excision repair
    124342895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpz03021]
    124342895
   03400 DNA repair and recombination proteins [BR:dpz03400]
    124342895
Transcription machinery [BR:dpz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124342895
DNA repair and recombination proteins [BR:dpz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124342895
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Zn_ribbon_recom zf-C4_Topoisom Lar_restr_allev DZR
Other DBs
NCBI-GeneID: 124342895
NCBI-ProteinID: XP_046652061
EnsemblRapid: LOC124342895
LinkDB
Position
6:complement(21673446..21674200)
AA seq 127 aa
MFTQNKRDDGPGFVGIRFCPSCNNMLYPKEDKENRALLYACRNCDFKTLADNHCVYVNKI
MHEIDELTQIVADVISDPTLPRTEDHPCPKCTHREAVFFQSQSRRAEEEMRLYYVCTNSN
CTHRWTE
NT seq 384 nt   +upstreamnt  +downstreamnt
atgttcacacaaaataaaagggatgacggaccaggatttgtaggaattcgtttctgtcct
agttgtaacaacatgttgtatcccaaggaagacaaggaaaatcgagctctactttacgca
tgtcggaattgtgattttaaaactttggctgataatcactgtgtctatgtcaacaagatc
atgcacgaaattgatgaactgactcagatagtggctgatgtcatatcagaccctacactg
ccgagaactgaggatcacccatgtcccaaatgcactcaccgagaggcagtatttttccaa
tctcagtcacgacgagcagaagaggaaatgagactttactatgtctgcaccaattcaaat
tgcacacacagatggactgagtaa

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