Deinococcus rubellus: N0D28_05440
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Entry
N0D28_05440 CDS
T08504
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
drb
Deinococcus rubellus
Pathway
drb00240
Pyrimidine metabolism
drb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
N0D28_05440
Enzymes [BR:
drb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
N0D28_05440
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Choline_kin_N
Motif
Other DBs
NCBI-ProteinID:
UWX65102
LinkDB
All DBs
Position
1029537..1030487
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AA seq
316 aa
AA seq
DB search
MSHPLLDFAPEVAQAIQDRRPLVALESTIISHGMPYPQNVETAREVESLIRLAGAVPATI
AVIGGRLKAGLSDDELEILGTDKSVQKISVRDLPMTVATGGHGATTVATTMRIAALAGIR
VFATGGTGGVHRGAGQTFDISADLMELARTPVAVVSAGVKSILDISLTLEYLETQGVPVI
GFGAAGFPAFYSRESGFAAPLVAESALAVARALFAQWSLSLPGRTAGGALIANPIPQEAE
IGRAEIDPVIEQALADMAAQGIKGKDTTPYLLGRIVEITGGRSLTANIALVKNNAVVAAQ
IAAELRALETAHENGD
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcccctgctcgattttgcgcccgaagtggcccaggccattcaggaccgccgc
ccgctggtggccctggaaagcaccatcatcagtcacggtatgccttacccgcaaaacgtc
gagacggcccgcgaggtcgaaagcctgattcgcctggccggggccgtgcccgccaccatc
gccgtgatcggtgggcggctcaaggcgggcctgagtgatgacgaactcgaaatcctcggc
accgacaagtccgtgcagaagatcagcgtgcgcgatctgcccatgacggtggcgacaggc
ggacacggtgcgaccaccgtcgccaccaccatgcggattgcggcgctggcaggtatccgg
gtgtttgccaccggcggcaccgggggggtgcaccggggggccgggcagaccttcgacatc
agtgccgacctgatggaactggcccgcacgcccgtcgcggtggtcagcgccggggtcaag
agcattctcgacatcagtctgacgctggaatacctggagacccagggcgtgccggtcatc
ggcttcggcgcggctgggttccccgccttctacagccgcgagtcgggcttcgccgcgccg
ctggtggccgagagcgctctggcagtggcccgcgccctcttcgcccagtggtcgctgtcc
ctgccgggccggacggcgggcggcgcgctgatcgccaatcccattcctcaggaagctgag
atcggccgtgccgagattgacccggtcattgagcaggccctcgccgatatggccgcgcag
ggcatcaaggggaaagacactaccccgtacctgctgggccgcatcgtggagatcaccggg
ggccgcagcctgacggccaatatcgccctggtcaagaacaatgcggtggtggctgcgcag
attgccgccgaattgcgagcgcttgagacggcccacgaaaacggtgactga
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