Deinococcus radiophilus: LMT64_07885
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Entry
LMT64_07885 CDS
T07688
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
drd
Deinococcus radiophilus
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drd03009
]
LMT64_07885 (rimO)
Enzymes [BR:
drd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LMT64_07885 (rimO)
Ribosome biogenesis [BR:
drd03009
]
Prokaryotic type
ribosomal protein modification factors
LMT64_07885 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UFA49812
LinkDB
All DBs
Position
complement(1546089..1547573)
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AA seq
494 aa
AA seq
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MTQTPSITPTAAPPRVGFISLGCPKALVDSERILTQLRAEGYEVAASYEDAQAVIVNTCG
FITPAIEESLSAIGEALDATGKVIVTGCLGERPEKIMERHPKVSAITGSEAVDDVMGHVR
QLLPVDQDAFTGLLPVAAPGMRPELPAREQTRHGDVFAPSVRLTPRHYAYVKVAEGCNHT
CAFCIIPKLRGLQVSRDAGPVLYEAFRLVAGGTKELVVIAQDTSAYGVDIRYRESEFQGG
QVRAHLTDLAEKLGELGAWVRMHYVYPYPHVDRIVELMAQGKILPYLDVPLQHASPKILK
AMRRPGAGRQLDTIRRWRDICPELTIRSTFIVGFPGETEEDFEELLDFLEAAQLDRVGAF
TYSEVPEADANALADPVPEAVKEERLARFMEVAQRISAGRLAQKVGRVMDVIVDEFNDDE
GDQPGTRLIGRTKGDAPGIDGQVYLYAAAFAGQIKIGDIVQARIEDSDEYDLFGEVVARP
EWRPNVPMLGHFKH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaccccctccatcacgccgactgctgcgccgccccgtgtgggctttatcagc
ctgggctgtcccaaagccctggtggacagcgaacgcatcctgacccagctccgtgccgaa
ggctacgaggtggccgccagttacgaggatgcccaggccgtgatcgtgaacacctgcggt
ttcatcacgccggccattgaggagtcgctgagtgccattggggaggcgctggacgccacc
ggcaaggtgatcgtgaccggctgcctgggcgagcgcccggagaagatcatggagcgtcac
cccaaggtgtcggccattaccggcagtgaggcggtggatgatgtgatgggccatgtgcgc
caattgctgccggtggatcaggatgcctttaccggcctgctgcccgtggcggcgccgggg
atgcgacctgagctgcccgcgcgtgagcagacccgccatggcgatgtcttcgcgcccagc
gtgcgcctgaccccacggcactacgcctacgtgaaggtggccgagggctgcaaccatacc
tgtgccttttgcattattcccaaactgcgtggcctgcaagtctcgcgcgacgccggccct
gtgctgtacgaggccttccggctggtggcgggcggcaccaaggagctggtggtcatcgcg
caggacaccagcgcctacggggtagacatccgctaccgcgagtccgagttccagggaggg
caggtgcgcgctcacctgaccgacctggccgagaaactgggtgagctgggcgcctgggtg
cggatgcactacgtctacccctacccacatgtagaccgtatcgtagagctgatggcgcag
ggcaagatcctgccgtatctggacgtgcccttgcagcacgccagtcccaaaatcctgaaa
gccatgcgccgtcctggtgccggtaggcagctggacaccattcgccgctggcgcgacatc
tgccccgagctgaccatccgttccacctttatcgtcggatttcccggcgaaaccgaagag
gatttcgaggagctgctggacttcctcgaagcggcgcaactggaccgggtaggggccttt
acctattccgaggtgcccgaagccgatgccaacgccctggctgaccctgtacccgaagcg
gtcaaggaagaacgcctggcccgctttatggaagtcgcgcagcgcatcagcgcggggcgg
ctggcgcagaaggtaggccgcgtgatggacgtgatcgtggatgagttcaacgacgacgag
ggcgaccagcccggcacccgtctgattgggcggacgaagggtgacgcccccggtattgac
ggccaggtctacctctatgccgccgcctttgctggtcagatcaagatcggggacatcgta
caggcccgcattgaggacagcgacgaatacgatctgttcggcgaggtggtggcccggcct
gagtggcggcccaacgtgccgatgctggggcacttcaagcactga
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