Deinococcus radiophilus: LMT64_10560
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Entry
LMT64_10560 CDS
T07688
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
drd
Deinococcus radiophilus
Pathway
drd00750
Vitamin B6 metabolism
drd01100
Metabolic pathways
drd01240
Biosynthesis of cofactors
Module
drd_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LMT64_10560 (pdxS)
Enzymes [BR:
drd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LMT64_10560 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
IGPS
His_biosynth
NMO
FMN_dh
TetR_C_27
NanE
Motif
Other DBs
NCBI-ProteinID:
UFA50292
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Position
2089675..2090571
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AA seq
298 aa
AA seq
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MTNQSEGQGVQKVQRGFAEMFKGGVIMDVVTADQARIAEEAGATAVMALERVPADIRKDG
GVARMSDPKMIKEIIGAVSIPVMAKVRIGHLVEAQILQAIGVDFIDESEVLTPADDQYHI
DKHAFKVPFVCGAKNLGEALRRVGEGAAMIRTKGEAGTGNIIEAVRHARTVLGEIRQIQA
RPLEELMTVARDLSAPYDLVRYVHEHGKLPVVNFAAGGVATPADAALMMQLGLDGVFVGS
GIFKSDNPERRAKAIVQAVTHYQNAELLAEISEDLGAPMTGINIDELLPEERLAARGW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccagagtgaaggacagggcgttcagaaagtacagcgtggatttgccgagatg
ttcaaaggcggcgtgatcatggatgtggtgacggcagaccaggcccggattgccgaggaa
gccggtgcgactgctgtcatggcgctggaacgtgtgccagccgacatccgtaaagacggc
ggcgtggcccgcatgagcgaccctaagatgatcaaggagattatcggtgctgtcagcatc
cccgtgatggctaaggtgcgcatcggacatctggtggaggcgcagattttgcaggccatc
ggcgtggactttatcgacgaatccgaagtgctgacccccgccgacgaccagtaccacatc
gataagcacgccttcaaggtgccgttcgtgtgcggcgccaagaacctcggcgaagcgctg
cgccgtgtgggcgaaggtgccgccatgatccgcaccaagggtgaagctggcaccgggaac
atcattgaagccgtgcgccatgcccgcaccgtactgggcgagatccgccagattcaggcc
cgcccgctggaggagctgatgacggtggcccgcgacctgagtgctccctatgacctggtg
cgctatgtgcatgagcacggcaagctgccagtggtgaactttgcagcgggtggcgtggcg
acacctgctgacgccgctctgatgatgcaactgggcctggacggcgtgttcgtaggcagc
ggtatcttcaagagcgacaaccccgagcgccgtgccaaggccattgtgcaggccgtgacg
cactatcagaacgccgaactgctggctgagatcagcgaagatctgggcgcccccatgacc
ggcatcaacattgacgaactgctccccgaagagcgcctggccgctcgcggttggtaa
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