Danio rerio (zebrafish): 100003342
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Entry
100003342 CDS
T01004
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca precursor
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04020
Calcium signaling pathway
dre04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100003342 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100003342 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
100003342 (grin2ca)
Ion channels [BR:
dre04040
]
Ligand-gated channels
Glutamate (ionotropic)
100003342 (grin2ca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
100003342
NCBI-ProteinID:
NP_001352716
ZFIN:
ZDB-GENE-070822-3
Ensembl:
ENSDARG00000078149
LinkDB
All DBs
Position
3:complement(19004576..19133834)
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AA seq
1400 aa
AA seq
DB search
MGVHLGCLSDTLWLPVLLLLSVCSVPCCQCRPFGMVEPTVNVAVVFSGSAYQTEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVVTSL
YPGYDTYVDYIRSFIDTSYFLWELQDTLTFDMSADGMNDLRARRLLQQIDAQVLLVYCSH
DEAQYLFSMAREVGLVGPGYIWFIPSLAVGNPNIAPPDSFPVGLISIITDRWKMSLRNRV
RDGVAIVVKGVESFRKQRGFIPDGHMDCLSPIRPASNGTLYRHMLNVSWENTDFSFNSDG
YLVNPSMIIITLDRGRQWDKVGNYESGILQMRYPVWPRYGTFLEPVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYCSPVGYNRSLVSAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVEDTDRKGNMQNPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPESGRTSLPPCLIGTDFSHGRLP
CIASVTDNHSPYPQNVDSTTQHLLEKPHVGTRPTSLRYTLPARTSHHHIYERTLPISSLS
SPHIAIRDPPPPTAPKPHVYMDQSCHHPTSRYVSYRDFQVPDIFVEHQEPSGSHKQYMAG
LGRKKRSHSYVAASPETRRRDDYDVPQSNLTELKSNHLLENHSHTTPCMRSHFQRPSSSC
NSCNKLYLEPEMDDVPLLGKDKLNRRASFLRATWGGDRIRQIDEKPSTSASSTSCINMPD
LFPRVVVTNPKTSKMYGSGGNNLRYNAAVEPAYLDPAHMGSYPYKPQKFKYSKSIRLPSY
REAILQNTAALRRSSSTLVHGHYSTYLNSYTDLPVYLGPLPQGPAHFHEHSKDMCHLFPC
VTHCPENAALVPRLGSRPVLYQSTAVGGYEGGGRANEGSLHTVPVSSMHRDRRQVLVARN
VHSPYAPRPWGRVSSLESEV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctaggctgtctcagcgacacactgtggctgccggtgctgctgctgctg
tctgtctgctccgtgccctgctgccagtgccgaccgttcgggatggtggagcccaccgtc
aacgtggcggtggtgttcagtggctccgcctaccagacggagatcaagggccgactgagc
cgcgagaacttcctggacctgccgctggaggtgaaccccatcactgtgctggtcaacaac
accaacccgcgcactctactgacgcgcatctgcgacacgctggctgctaacagagtgcac
ggggtggtctttgaagataacattggctctgaggccgtggcgcagatcctggacttcatc
tccacgcagacagccgtgcccatcgtaggcatcagtggggggtcggctgtcgtcctgcct
cacaagggtgacggctctactttcctccagctgggctcctccatcgaacagcagatcaac
ggcatgttcaaggtaatggaggagtacaactgggacagttttgtggtggtaaccagtcta
tacccgggctatgacacctatgtggactacatccgctccttcatcgacacctcgtatttc
ctgtgggagctgcaggacaccttgacgtttgacatgtcggcggacggcatgaatgatctc
cgtgcacgtcggttattacaacagatcgacgcgcaagtgctgctggtttactgttctcac
gatgaggcccagtatcttttctccatggccagggaagtgggtctggttggtccaggctac
atctggtttatccctagccttgcggtgggaaaccccaatattgcgcccccagacagcttc
ccagtgggactgattagcatcatcaccgaccgctggaagatgagcttgaggaacagagtc
agggatggagtggcaatcgtggtgaaaggagtggagagttttcgcaaacagagaggcttc
attcctgatggacacatggactgtttgagtcccatccggccggccagcaatggcacgctc
tacaggcatatgctgaatgtgtcgtgggagaacactgatttctccttcaacagtgatgga
tatctggtcaacccttcaatgatcataatcactctggaccgtgggagacagtgggataag
gtggggaattatgagtctggtatcctgcagatgaggtaccccgtctggccacgttacgga
actttcctggagcccgtgtctgataaccgtcacttgacggtcgccacattggaggaaagg
ccttttgtgattgtagaagctgtggatccggttactggcacctgcctcagtaacaccgtc
ccctgcagacgccagtcaaacaagacagaaactatagtcggacacacagagccttacacc
aaactctgctgcaaaggcttctgcatagacatcctgaaaaagctctctcgcaacatcaag
ttctcctatgacctctacctggtcaccaacggcaaacatggcaaactggtacgaggaatc
tggaacgggatgatcggagaggtgttttataagcgagcagacatggccatcggctctttg
actataaatgaggagcgttcagagatcattgacttctctgtgccgttcgtggagacgggc
atcagtgtgatggtggccagaagcaatggaactgtgtctccttcagccttcttggagccc
tacagcccagcggtgtgggtcatgatgttcgtcatgtgtcttacggtcgtggcagtgacg
gtgtttgtgtttgaatactgcagtcctgtgggctacaaccgcagcctggtcagtgccaaa
gatccaggtggtccgacgttcaccattgggaagtcggtctggctgctgtgggggatcgtc
ttcaacaactcagtgcccatcgaaaaccccaaaggcaccaccagcaagataatggtgctg
gtgtgggccttctttgctgtgatcttcctggcaagttacacagccaacctggcagccttc
atgatccaggagcagtacattgacacggtttctggactcagtgacaagaagttccagaaa
ccgcaggaccaatatcccccattccggtttgggactgtgcccaatggcagcacggaacga
aacataaggagcaattatcccgaaatgcattcccacatggttaaatacaaccaaaaaggt
gtggaggatgctctcaacagcctcaaaactggcaagctggatgccttcatatatgatgca
gccgtgcttaactacatggccggtaaagatgaagggtgtaaattggtgaccattggtagc
gggaaggtgtttgctacgacaggctacggtatcgcccttcagaaagaatctcgatggaag
cggccgattgacctcgctcttctccagttccttgctgacggtgacactcagaagctgcag
acggtgtggctcactgggatctgtcgtaatgagaagaaggaggtgatgagctctaagctg
gacattgacaacatggctggagtgttttacatgcttctggtggctatgggtctcagtctg
ctggtctttgcctgggaacatctactgtactggaagctgcggcattcagtccgcaagtct
gagcgattggacttcttgctcgccattagcaggggaatctacagctgcttcaatggtgtg
gaggacacagaccgtaaaggaaacatgcagaacccagatgtcaccaccagttacactcaa
gctaacatgctaaagatgctccaaacagctaaggatatagtctcatctgcaagagtggaa
aactccctggacaatgccactaaaactatagagaactggagtcgtcgtgatccagagtca
ggcagaactagtcttcctccctgcctcattggaaccgacttcagccatggccgcttgccc
tgcattgccagtgttacggacaaccactctccgtaccctcaaaacgtggacagcacgact
cagcacctgctggagaagcctcatgtgggaacacggcctacctcactgcgctacactctt
cccgcacgcaccagtcaccatcacatctacgaacgaacgcttcccatatctagcctcagc
agccctcatattgccataagagacccaccaccacctacagctccaaaaccacatgtctac
atggaccagtcctgtcaccaccctacctctcgttacgtctcataccgtgactttcaggta
ccagacatctttgtggaacaccaagaaccctctggaagccataaacaatacatggcaggt
ctgggtcgcaaaaagaggtcccacagctacgtagcggcatctccagaaacccgacggagg
gacgactatgatgttccccagtccaatctgactgagcttaaaagcaaccatcttctggaa
aaccattctcataccacaccctgcatgaggagccactttcagaggcccagctctagctgc
aactcctgcaacaagctgtacctggagccggagatggatgacgttccacttttggggaaa
gataaactcaaccgtcgcgcctcttttctcagggccacatggggtggtgacaggatccgc
cagatagacgagaagccctccacctcggcatcttctaccagctgcattaacatgcctgat
ctgttccctcgagttgtggtgaccaatcccaagacttcaaagatgtacggcagcggtggt
aacaaccttcgctacaatgcggctgtggagccagcctatctggacccagcgcacatgggc
tcctacccgtacaagcctcagaagttcaaatactcaaaatccatccgccttccttcatac
cgggaggccattctacaaaatacggcagccctgcggcgctcctcgtctacattagtacat
ggacactactcaacgtatctgaactcttatacagacctaccggtgtacttgggtcctcta
ccgcaaggacctgctcacttccatgagcattccaaagacatgtgccacctgtttccatgt
gttactcattgcccagaaaatgctgccttggtgccccggttaggcagcaggcctgtatta
taccagagcactgctgttgggggctacgaggggggcgggcgcgcaaacgaggggtcattg
cacactgtgccggtctcttccatgcacagggaccgcaggcaggttctagtagcacggaac
gtgcatagtccctatgccccacggccttggggtagggtgtctagtctggaatcagaggtt
tga
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