Danio rerio (zebrafish): 317740
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Entry
317740 CDS
T01004
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
317740 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dre03032
]
317740 (pola1)
Enzymes [BR:
dre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
317740 (pola1)
DNA replication proteins [BR:
dre03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
317740 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-DNA_Pol
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
317740
NCBI-ProteinID:
NP_001292393
ZFIN:
ZDB-GENE-030114-9
Ensembl:
ENSDARG00000045308
UniProt:
E7FB68
LinkDB
All DBs
Position
24:23840821..23932525
Genome browser
AA seq
1468 aa
AA seq
DB search
MAPVSNPDKDMDGGDCDASDTCGIAASRSRREKKEKVGRKSALEQLKRAKKGEKVKYEVE
EFTSIYDEVDEEQYSKIVRERQDDDWIIDDDGTGYVEDGREIFDEELDDDALGPKSKQAA
KGGDSKKNVKKSSVSKPNSIKSMFMNSNVKKPAEKHVDLSQDDLLGDILQDLHSEKSVVL
TPPPIITLKKKKTLGSPMNPFSVKPQMPKELPEVHVSKPRPVVTRVPPADPSPRSAASVE
PSKATAAQIKKPKIEEPEEEAIEFDEMDFDEPMEAENLEEEPVKEKAEPETKPIVKVEPK
TEPQDKMLISGLVGGMGWEKMEEGKPIETPVEVQVDSSQLPLVEGPDGDMVFRFYWLDAF
EDQYNQPGVVFLFGKVWIESAEAHVSCCVAVKNIERTMYLLPREHKVNLATGEKGVAVGM
MDVYKEFNEISEKFKIMKFKSKPVTKNYAFEIPDIPSQSEYLEVKYSAEIPSLPSDLKGT
TFSHVFGTNTSSLEHFLLNRKIRGPCWLDVTTPQLSNQPISWCKVEAVAQKSDLISVVKD
LSPPPLVVMSISLKTVQNPKTHQNEIVSIAALVHHTFPLDKAPPRPPFQTHFCVVSKPND
CVFPYDFKDAVRKKNGIVEIAGTERALLGFFLAKMHKIDPDVLVGHDIFGFDLEVLLQRI
NVCKVPHWSKIGRLRRANMPKLGGRSGFAEKSATCGRLVCDIEISAKELIRCKSYNLTEL
VSQILKAERPVVPPENIRNFYSDSTHLLYLLELTWMDAKLILQIMCELNVLPLALQITNI
AGNVMSRTLMGGRSERNEYLLLHAFHERDFIVPDKQFFKKAQQDLGEDEEGDSGKGKSNK
TRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVERGATNTRKKTEE
DEDEIPELPDQSLEMGILPKEIRKLVERRRQVKQLMKEPDLNPDLYLQYDIRQKALKLTA
NSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKEMVQRMNLEVIYGDTDSIMINTNST
NLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALMVEPQGDGKYTTKQE
LKGLDIVRRDWCDLAKECGNYVIGQILSDQNRDTIIENIQKHLIEIGEKVANGNIPLNMF
EIHKSLTKEPQDYPDKKSLPHVHVALWINSQGGKKVKAGDTVSYVICQDGSNLAASQRAY
TLEQLQKQPGLNLDTQYYLSQQVHPVVGRICEPIEGIDAVLIATWLGLDPSHFRAQQQQR
EDEADDFLGAPAQLTDEERYRDCERFTFTCPDCGTENIYDNVFEGTGSTLQLSLKSCCHV
PCGGSPMDHQVQIGNKLQLDIRRHIRRYYSGWLLCEDQACRNRIRRLPIAFSRSGPICPA
CLRSTLKPEYSEKALYNQLSFYRYIFDWEYAINKVLTGDDKLKFKSKEWKEEMEVYKKLK
GVTDNILATSGYSEVNLAKLFQAFITLK
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtttcaaatcccgataaagacatggacggcggagattgtgatgcatccgac
acatgtggcattgccgcctcacgttccagaagggagaaaaaagagaaagtcgggcgcaag
tctgctttagagcaacttaaaagagccaagaaaggagagaaagtaaaatacgaggtggag
gagttcaccagcatttatgatgaagtggatgaagagcagtactcgaaaatagttcgggag
agacaggatgatgattggatcattgatgacgatgggacaggttatgtggaggatggcaga
gaaatctttgatgaagaattggatgatgatgcattgggccctaaaagtaaacaggctgca
aaaggaggtgattcgaaaaagaatgtgaagaaatcatctgtcagtaaacccaacagcatt
aaaagcatgtttatgaacagtaatgtaaagaaacctgcggagaaacatgtggatttgtct
caagatgatctgctgggagatattttgcaggacttgcactctgagaaatcagttgtgctc
actccaccaccgatcattactctgaagaagaagaaaacactgggctcccctatgaatcca
ttttcagtcaaaccacagatgccaaaggagttgcctgaagtccacgtatcaaagccgagg
cctgtggtgacacgagttcctcctgctgacccttcgcccaggtctgcagcttctgttgaa
cctagtaaagcaactgccgcacagataaagaaacctaagatcgaagagcctgaagaggag
gcaatcgagtttgatgagatggactttgatgagcccatggaggcagaaaacctggaggag
gagcctgtgaaagagaaggcggagcccgagaccaagcccattgttaaagtggagcctaag
actgaaccacaggataaaatgttaatatctggactggttgggggcatgggctgggagaag
atggaggaggggaaacccatcgagactccggtggaagtgcaggtggactcgagtcaactc
ccgctggtggagggaccagatggagatatggtcttccgcttctactggttggatgctttt
gaagatcagtataaccaacctggagtggtgttcctgtttggaaaagtttggatcgagtct
gctgaagcacatgttagctgttgtgttgctgtaaagaacatagagagaacgatgtatctc
cttccacgagaacataaagtaaatctggcaaccggcgagaagggcgttgcagtaggaatg
atggatgtgtacaaggagttcaatgagatctctgagaagttcaaaattatgaagtttaaa
tccaagccggtgaccaagaattatgcttttgagatcccagatatcccctctcagagcgag
tacctagaagtcaaatactctgctgagattccttcattgccatctgacctgaagggcact
acattttcccatgtgtttggtaccaacacctccagtttggaacacttccttctgaatagg
aagattcgtgggccttgctggcttgatgtgacaacccctcagttaagcaatcagcctatt
agctggtgtaaagtggaggccgttgcacagaagagtgacttgatctcagtagtaaaagat
ctgtcgcctcctccactggtggtcatgtccataagcctcaagaccgtgcagaaccccaag
actcaccagaatgagattgtttccatcgctgccctcgttcatcatacatttcctctggac
aaagctcctccacggccgccgtttcagactcatttctgtgtggtgagcaagcctaatgac
tgtgtcttcccttatgactttaaggatgcagttaggaaaaagaacggcattgtcgagatt
gctggtacagaacgtgcgcttttaggcttcttcttggccaagatgcacaagatcgatcca
gatgtcttagtgggccatgacatctttggttttgaccttgaagtgcttttgcagaggatc
aatgtgtgtaaagtacctcactggtcaaagatcggccgtctaagaagagccaacatgccc
aaactggggggtcgcagtggctttgctgagaagagcgcaacttgtgggcgcctggtctgt
gatattgaaatttcagccaaagagctgatccggtgcaagagttataatctgactgagctg
gtgtcccagatcttgaaggcggagaggccggtggtgccaccagagaacatcaggaatttc
tacagtgattccacacatttactctaccttttggagctcacctggatggatgctaagctc
attctacaaatcatgtgcgaattaaatgtactcccgctagcactgcagatcactaacatc
gctggtaatgtcatgtctcgtactttgatgggtggacgctctgagaggaatgaatatctt
ctgctccatgctttccatgagagggacttcattgttccagacaagcagttcttcaagaag
gcacaacaagatctgggtgaggatgaagagggtgactctggaaagggcaagtcaaacaaa
actaggaagaaggcagcatatgctggaggtctggtgctcgacccaaaagtcggtttctat
gacaagttcattctgctgttggacttcaatagtttgtacccctccatcattcaagagttc
aacatctgctttacaaccgttgagagaggagctaccaacacacgcaagaaaactgaggag
gatgaagatgagattcctgagcttccggatcagagtctggaaatgggcattcttcccaag
gaaatccgcaaactggtggagcgcagacgacaagtcaaacagctaatgaaagagccagac
ctcaacccggatctgtacttgcagtatgacatcaggcaaaaggccctgaagctgacagct
aacagcatgtacggatgccttggcttttccttcagtcgcttttacgccaagcctttggca
gcattggtcacgcataaaggaagagagattttgatgcacaccaaagaaatggtacagagg
atgaatctggaggtcatatacggggacactgactccatcatgattaacaccaacagcacc
aatttagaggaggtcttcaaactgggaaacaaggtcaaaagtgaggtgaataaactctat
aagctcctggagatagacatagatggtgtatttaagtcccttctgctgctaaaaaagaag
aaatatgcagcactgatggttgagccacagggagatggcaaatacaccaccaagcaggag
ctcaaaggcctggacattgtgcgtagagattggtgcgacctcgccaaggagtgtggaaat
tatgttattggtcagattctgtcagaccagaatcgggacaccatcatagagaacattcag
aaacatctgattgaaatcggagagaaggtggccaacggcaacatcccactcaacatgttt
gagatacacaagtctctgacaaaggaacctcaggactaccctgacaagaagagtctccct
catgtccatgttgctctctggataaactcccagggtgggaagaaggttaaagcgggtgac
actgtttcttatgtcatctgtcaggatggttcaaacctggctgccagtcagagggcatat
accttggaacagctacaaaaacagccaggactcaatctggacacacagtactacctgtcc
cagcaggtgcaccctgtggtcggccgaatctgtgagcctattgaaggcattgatgcagtg
cttattgctacgtggttaggacttgacccaagtcacttccgagcccaacagcagcagcgc
gaggacgaagcagacgatttcctaggtgctccagcccagctcacagacgaagagcgttac
cgagattgcgagaggtttaccttcacctgccctgactgtggaaccgaaaacatctacgac
aacgtgtttgaagggacggggagcaccttgcagcttagcctgaagagttgctgccacgtt
ccctgcgggggcagtccgatggaccatcaagtacaaattggcaataaactgcagttggac
attcgccgccacatcaggagatactacagcggatggctgctatgtgaggatcaggcctgc
cggaaccgaatccgtcggctgcccatagcattctccaggtcgggaccgatctgtccagcc
tgtcttagatccacactgaagcctgagtattctgagaaggccctctacaaccaactgagc
ttctacagatacatctttgactgggaatatgccatcaacaaggtcctgacaggagatgat
aaattaaaattcaagagtaaagaatggaaagaagaaatggaagtgtacaaaaagctgaag
ggtgtaacagacaacatcctcgccaccagcggatactctgaagtcaaccttgccaagctt
ttccaggcctttataaccctcaagtaa
DBGET
integrated database retrieval system
