Danio rerio (zebrafish): 553337
Help
Entry
553337 CDS
T01004
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K06243
laminin, beta 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
553337 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
553337 (lamb2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Motif
Other DBs
NCBI-GeneID:
553337
NCBI-ProteinID:
XP_005162178
ZFIN:
ZDB-GENE-030131-4205
Ensembl:
ENSDARG00000033950
UniProt:
A0A8M9PDX2
LinkDB
All DBs
Position
23:complement(20262929..20338756)
Genome browser
AA seq
1836 aa
AA seq
DB search
MMERYFSVLLLVLPALAQDLPSAPHGCMDGSCYPATGNLLIGRAINLTTSSTCGLDGPEP
YCIVSHLKDSEKCFICDSENPYDANYHRDSHRVENVIYPMDSTGELTWWQAVNGEENVSV
RLNLEAEFHFTHLIMKFKTFRPAAMIIERSSDFGRTWRIYRYFAYNCTKTFPRVPAHSLR
FIDEVICEERYSDIEPSTDGEVIYKVLDPAIHVKDPYSLDIQDLLRITNLRINFTKLHTL
GDNLLDRRPDVLQKYYYALYELVVRGSCFCYGHASECAPVPGVTTRDSGMIHGRCVCKHN
TVGLNCERCRDFYHDAPWRPAETDNAHTCRECNCNGHSNQCHFDMAVYLATGNVSGGVCN
NCLHNTMGRNCESCKPFYYQDPEKDIRDPAACVPCDCDPVGSVEGGVCDSHTDLDLGMIG
GQCRCKQNVRGQRCDYCKEGHYGLSLDDPLGCQPCNCDPRGITTLGVPCDQISGDCSCKR
YVTGRYCNQCLPEYWGLSHDLAGCRPCNCDFGGATSSRCMMDSGQCDCRPHLIGRQCSEV
QPAFFCASLDYYKYEAEAVMGRSPEDLTLPGSPRPQAETDCVQHLNNQLRRHRRHRHIAQ
QQRAALRRIRQLQQTPSVSSVHRERQPGQMVTWTGPGFARVKDGAGLEFAISNIPYAMEY
DIMIRYEPESTEDWEALVSVTSVNLPISLRCGNMLPTEQLYTVPMPHNVRYIKMPKPFCF
EPNNRYVVSIRFQRHAVSHRHLTAFILIDSLVLIPRYEELTGFQGDEGADERRRQEMESY
MCLESFMTMPMPALAELCTSLICSISAIMHNGALGCQCDPQGSLSAECDRVGGQCRCKPN
VIGRKCNQCAPGTYGFGPYGCTVCDCHSQGSVGHHCDPVTGQCMCRHGAIGRQCSECQPG
QWGFPNCRQCQCNSHAESCDPESGACYDCRDNTAGQLCERCVDGYYGNPALGSGEHCRPC
PCPGHPDSGHSNGASCEVDYASNQILCQCGQGYAGPRCDRCAPGYYGDPEHPGGSCRPCQ
CNGNIDPQDPESCDPRTGLCLKCLYNTDGDSCSECKLGYYGNALIQDCRRCTCVTAGTLP
NSCTDGVCQCDKQTGQCPCKQNIIGHNCDQCATNHWNFGSDCGCEPCGCVQPNALSTHCN
MFSGQCHCQPGFGGRQCNECEAFHWGDPRVQCEECNCHPLGSETSQCDRTTGACVCKDGA
SGQRCDECARGFTGNFPKCVPCHPCFQLWDDVVCQVRRDLTHFRDIIAMILEKGEVPGVS
DKRILELEKKLAQAQELVRDGDREGTFNLISQTVDDLRAEIALTDGRLMGVIRDLNVTTD
HNNDLKQNLTALEKELKDLNNTLHQLRRELENYLTAGLAEQFANVLKYYQRSLNSEQRCN
ASVYGPQSPVEQSQDTRNRTEALLKDKKDSLLRTATANNKSLSELEGKAHEINRKVHHLS
NKVCGGHANGNVNGSCEESPCGGAGCRGSDGVLKCGGRGCNGTVGASVKALDNADEVHKN
LTAVSEELQTMAKKLRDIATLTQTVKTQAKETLDKAQNKKDMFEKSNKMLKNFIQKIKDF
LNEEGADPESIEKVAQQVLAISLPVNRTVIVNLVEQIKDSIVNLTNVEGVFNHTSEQLAK
VNDLLKKAQDAKTQADGVSDNINKTKEALETSQNAIKKAEEEMSTALKNLKNIQNITAMV
DDKLLNLDNNLTDVMMRLVNLSNGVDLLKNKTEQNREMAKEAKAQSDNATREAEGLQEEL
TNAETLYKQLKEKVDSAGGTGEGNVNQKAIEMKKEAEDLLKKATMGMETLKKLERKFNKN
EQKMQQQRDELTDLEKNVTGIREYIRSKVLAYNNCQ
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagatatttcagtgttctgcttcttgttcttcctgctttggctcaggatctg
ccctctgccccacatgggtgcatggatggtagctgttatccagcaacaggcaaccttctg
attggccgagctataaacctgaccacttcctccacctgtggcctggatggacccgagcca
tactgtattgtcagtcatttgaaggattcagaaaagtgctttatatgtgactctgagaat
ccgtatgatgccaattatcacagagacagccacagagtggagaacgtcatctacccgatg
gacagcacaggggaactcacatggtggcaggctgtaaatggagaggagaatgtcagtgtc
agactgaatcttgaggccgagttccactttactcatctcatcatgaagtttaagacattt
agacctgctgctatgataattgagcgttcctctgattttggccgtacatggaggatatac
cgctactttgcttacaactgcactaagacatttcctagggttcctgcgcactcgctgcgg
ttcattgatgaagtcatttgtgaagagcgctactctgatattgagccatccactgatgga
gaggtcatctacaaagtgcttgatcctgcaatccatgtcaaagatccatatagtctggac
attcaggatttgttgcggatcactaacctacggataaacttcactaaactgcacactctg
ggtgataacctgcttgaccggcgtcctgacgtgctgcagaagtattactatgcattgtat
gagctggttgtgcgcgggagctgcttctgttatggccatgcatcagagtgtgcaccagta
cctggagtgaccactagagattcaggcatgattcatggacgctgtgtctgtaagcacaac
actgtgggattaaactgtgagcgctgcagagatttttatcatgatgcaccctggaggcct
gctgagaccgataatgcacacacctgcagggaatgcaactgtaatggtcactccaaccag
tgtcattttgacatggcggtgtatttggcgacggggaatgtcagtggaggtgtgtgtaac
aactgtcttcacaacaccatgggccgcaactgtgagagctgtaagcctttctactaccag
gatcccgagaaagacatcagagacccggcagcgtgtgtcccctgtgactgtgaccccgtg
ggctctgtggagggaggagtgtgtgacagtcatacagatctggatttgggaatgattggt
ggtcagtgccgttgtaagcagaatgtcagaggtcagcgctgcgactactgtaaagaggga
cattatggtctcagtcttgatgacccattaggatgccagccttgtaactgtgaccctcgt
ggcatcactacactgggggttccgtgtgatcagattagtggggactgctcttgcaaaaga
tatgtaacaggacgctactgcaaccagtgcctgcctgaatattggggactcagtcatgat
ctggctggttgcaggccctgcaactgtgactttggtggagcaacaagcagcagatgcatg
atggacagcggtcagtgtgactgccggcctcatctgattggacgacagtgttctgaagtg
cagcctgcatttttctgtgcttctttggattattacaagtatgaagcagaagcagttatg
ggccgctctcctgaagatctcacacttccaggcagcccaaggcctcaggctgagactgac
tgtgtgcagcatctgaacaatcaactgagaagacaccgccgtcacagacatattgcacaa
cagcagagggcagcactgagacgcatccgacagctgcagcaaacacccagcgtgagctca
gtgcacagagagagacagccgggtcagatggtcacctggaccgggccgggcttcgctcgg
gttaaagacggggctggtcttgagtttgccatcagcaacatcccttatgccatggagtat
gacattatgatccgatatgagccagagtccacagaagactgggaggctttagtgagcgtc
acatccgtgaatttacccataagcctccgctgtggcaacatgctgcccacagagcagctg
tatacagtcccaatgccccacaacgtgaggtacattaaaatgccaaagcccttctgcttc
gagccaaacaaccgctatgtggtgtccattcggttccagcgccacgccgtgtctcaccgc
catcttaccgccttcatcctgatagactcacttgtgctgattcccagatatgaagagctt
actggatttcagggtgatgaaggtgcagatgagcgtcgtcgtcaggagatggagtcgtac
atgtgtttggagtccttcatgactatgccaatgccagcgctggctgaactgtgcacttct
cttatctgcagcatctctgctatcatgcacaatggtgcactggggtgtcagtgtgaccct
cagggttcattaagtgcagagtgtgacagagtcggaggtcagtgtcgctgtaagcccaac
gtgattggccgtaaatgtaatcagtgtgcaccggggacatatggattcggcccctacggc
tgcactgtatgtgactgtcactcgcagggttctgtcgggcatcattgtgaccctgtgacg
ggacagtgtatgtgtcggcatggggcgattggccgccagtgctcagaatgccagccgggt
cagtggggatttcctaactgtaggcaatgccagtgtaacagccatgcagagagctgcgat
cctgaaagcggggcctgctatgactgcagagacaacacagctggacaactgtgcgagagg
tgtgtggatggttattatggcaacccagcacttggttctggtgagcactgtcgcccatgt
ccgtgtccaggacaccctgacagtggacattccaacggtgcctcctgtgaagtagactac
gcctccaaccagatcctttgccagtgtgggcaaggctacgctggtcctcgctgtgatcgc
tgcgcccccggttattatggtgaccccgagcaccctggtggatcgtgccggccctgccag
tgcaatgggaacattgaccctcaggacccagagtcatgtgaccctcgaactggactgtgc
ctcaagtgtctgtataacacagatggagactcttgctcagagtgtaaactgggttattat
ggaaatgcactcattcaggactgtaggcgatgtacttgtgtaactgcaggcactttgcca
aactcttgcactgatggagtgtgtcaatgtgataaacagacaggacagtgcccctgcaag
caaaacatcattggacataactgtgaccagtgcgccaccaatcactggaacttcggctct
gactgtggatgtgaaccctgtggatgtgtccaacctaatgccctcagcacccactgtaac
atgtttagtggccagtgtcactgtcagccaggttttggggggcggcagtgcaatgagtgt
gaggcgttccactggggcgatcccagagtgcaatgtgaagagtgtaactgccatcctctg
ggctctgagacgtctcagtgtgaccgcacaacaggcgcatgtgtgtgtaaggacggagct
tcaggacagcgctgtgatgagtgtgcacgcggctttactggaaacttccccaaatgtgtt
ccctgccacccctgcttccagctgtgggatgatgtggtgtgccaggtccgccgagatctg
acccacttcagggatatcattgctatgattctggagaagggtgaggtgcctggagtcagc
gacaagcgcatacttgaactagagaagaagctggcacaggctcaagaactggtccgggat
ggagacagagagggaacatttaacttaatcagccaaactgttgatgacttgagagcggag
atcgctttgactgatggacgtctgatgggtgtaatacgggatctgaatgtgacaacagac
cataacaatgatctgaaacaaaacctaactgccctggagaaagaactgaaagatctgaac
aatacgcttcaccagctgcgcagagagctggagaactacctcactgctggactggcagag
caatttgcaaatgtgctgaagtattaccagagatccctgaattcagagcagcgctgcaat
gcctccgtatacggaccccagagtcctgtggaacagtctcaggacacacgtaaccgtacc
gaagccctgctgaaggacaagaaggacagcctcctgcgtacagccacagctaacaataaa
tccctgtctgaactggagggaaaagctcatgagatcaaccgaaaggtccatcaccttagc
aacaaggtctgcggtggccacgccaatggcaatgtgaatggtagctgtgaagagagcccc
tgtggaggagcgggatgtcgtggcagtgatggtgtgctgaagtgtggaggtagaggatgt
aatggaactgttggtgcttcagtgaaggctttagacaatgctgatgaggtccataagaac
ctgactgctgttagcgaggagctccaaaccatggctaagaagctacgagacattgctacg
ctcactcaaactgtgaaaacacaagccaaagaaactctcgataaagcccagaacaagaag
gacatgtttgagaagtccaacaagatgctcaaaaacttcatccagaagattaaagacttt
ctgaatgaggagggagcagatccagaaagcattgaaaaagtggcccagcaggttctggca
atctccttgccagtcaacaggactgtaatagtcaacttagtggagcaaatcaaagacagc
atcgtcaacctcaccaacgtggagggagtgttcaatcacacctcagaacaactggccaaa
gtcaacgatctactcaaaaaagctcaggatgcaaagacacaagctgatggagtgagtgat
aatatcaataaaacaaaagaagcacttgaaacctcacagaatgccataaagaaagctgaa
gaggaaatgagcacagctctaaaaaacctcaagaatatccagaacatcactgccatggtt
gacgacaaactcttaaatttagacaacaaccttacagatgtgatgatgcgtttagtcaat
ttgtcaaatggagtggatttattaaagaataaaacggagcagaacagggagatggccaaa
gaagccaaagcccagtcggacaatgcaactcgagaagcagagggacttcaagaggagctg
acaaatgctgagactctgtacaaacagctgaaagagaaggtggactcggctggagggaca
ggagaaggcaatgttaaccagaaagccatagagatgaagaaagaagcagaagatctgctg
aagaaggccaccatgggcatggaaactctcaaaaaattggagagaaagttcaacaagaac
gagcagaaaatgcagcagcaacgggatgaactgacagatctggagaaaaatgttacaggc
atcagagaatatatcagatcaaaagtattggcctacaacaactgtcagtag
DBGET
integrated database retrieval system
