Danio rerio (zebrafish): 557935
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Entry
557935 CDS
T01004
Symbol
zmp:0000001082
Name
(RefSeq) integrin alpha-D isoform 1 precursor
KO
K05718
integrin alpha L
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04514
Cell adhesion molecules
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
557935 (zmp:0000001082)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
557935 (zmp:0000001082)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
557935 (zmp:0000001082)
04515 Cell adhesion molecules [BR:
dre04515
]
557935 (zmp:0000001082)
04090 CD molecules [BR:
dre04090
]
557935 (zmp:0000001082)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
557935 (zmp:0000001082)
Cell adhesion molecules [BR:
dre04515
]
Integrins
Integrin alpha subunits
557935 (zmp:0000001082)
CD molecules [BR:
dre04090
]
Proteins
557935 (zmp:0000001082)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
VWA_2
VWA_3
FG-GAP_2
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
557935
NCBI-ProteinID:
NP_001373553
ZFIN:
ZDB-GENE-140106-42
Ensembl:
ENSDARG00000098899
LinkDB
All DBs
Position
1:complement(59555580..59568574)
Genome browser
AA seq
1151 aa
AA seq
DB search
MEMCVFTLLMCACLSEAFNMDTEHPLVYNGSAADFFGYSVHQSESSTQIIVGAPLARNST
GEIYTCASDLRSCKALRRPDSERVRFFSMSVSVSPDAPLTSCSPYLPHDCDGNSYLNGIC
YQFNSGLQAVSNFTAAYQECTKREVNLVFLFDGSRSMKPEEFDLNKDFITDIMKKLSNSS
IKFAAVQFATTFSTVFDFNDYQLGSAEQKLQKEKHMSALTNTHGAIKYVLENLLNNVSSG
ANPKAQHALVIITDGDPTDRDNEHVLEKCDKQNILRYIIGVGGLANLARLTSLASEPKHN
NTFFIKDYKGLEGLLDNLQKKIYNIEGSTEAHSKDRLKELSQSGFSVINHKDSVIVGSVG
SNDWRGSLYEVTGSGSGVKETEIRDPFVSKDSYMGYSAVLGARAGVSFLFSGAPRAEHMG
LVTLFIKNDSSWRVSWNISGEQIGSYFGASLSLLDVDSDGDSDFLLVGAPLFHQSQPRAE
GKLYVYTFSDGPFQKMLNVSGSNIGRFSASLASLKDLNGDSLSDVAVGAPLENDGEGVVY
IYLGDGMRGINLNHAPQRISGRSVLPGLQQFGVSLSGQMDMSDDNLTDVVIGARGGMVLL
KARPVMSVSVQLSFSPNEINLNYFECPSDKVLNVFNLTSCFTMKEQTSSNGSLDKKLNVS
LELNVDVMRGINRGFFVQRDSSSKALQQLLLLDSGIFCRSFPVFMPGCVADTVSPLKIRM
NFSQSEMSGSSVAVLDVYSRTEEYVEVPFQRNCNSNNSCVADLKLDFSFRNNTLVVANQA
HFTLLISLENPGDDSFNTSIVLHYPDGLSLSNFLTVKPSRTRSSCGDRDSGATNRTTCSI
NLPVYRSGTTTQFQATFRVSKWDYDWSDMMEMMITANSDNNGNTSAAAVRRSVPVQFAVD
VAISLSAEDSVTYLNFSLEDRGPKPLRIVYKVENLGVKGLPVRVSLHLPCPTTPVRLSKQ
KFSVQQNSTDVACTSSEDDHCETIECSQFHLDKHSVVQFILTADATFQSVKEYESKFSFQ
ELRKDFSLNISAELNYNRSRYNQTSTGLKDDPHKSQITVKAEFVLPPNRMLIISVGAGGG
LILLIIIFFLLVKCGFFKRRRPEEFPSQTDDVSALENSPEDSPLMDTDAKDGAGVAVKEN
GASADPTNTEQ
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtgtgtcttcaccctcctcatgtgcgcgtgtctttcagaggccttcaacatg
gacaccgaacatccgctggtgtataacggcagcgcagcagatttctttggttacagcgtt
catcagtctgagagcagcacacagattattgtcggagctccattagccaggaactcaaca
ggtgaaatctacacctgcgcatcagatctgcgctcctgcaaagcgctgcgccggccagac
tcagagcgcgtccgcttcttcagcatgtctgtgtctgtgtcgcctgacgctccgctgact
agctgcagtccgtatctccctcatgattgtgatggaaactcgtatctgaacggcatctgc
taccagttcaacagcggcttacaggccgtctccaacttcactgccgcttaccaagaatgc
acaaagagagaggtcaacctggtgtttctgtttgatggatcccgcagtatgaagccagaa
gagtttgatctgaataaagacttcattacagatatcatgaagaaactgtcgaactcctcc
ataaagttcgctgccgtccagtttgcaacaaccttcagtactgtgtttgacttcaacgac
tatcagctcggctccgctgaacagaaactgcagaaggagaagcacatgagcgcgctcaca
aacacacacggggccatcaaatacgtcctagagaatctgctgaataacgtgtcgtctgga
gccaatcccaaagctcagcacgccctggtgatcatcacagatggagaccccaccgatcgg
gataatgaacatgtgctcgagaaatgtgacaagcaaaatatcctgcgctacatcattggg
gtgggaggccttgcaaatttagccagactaacttcactggcatcagaaccaaaacacaac
aacactttctttattaaggactataaaggactcgaaggacttctggataacctgcaaaag
aagatctacaacattgagggctcaacagaagcacacagcaaagacagactgaaagagtta
tcacaaagcggattcagcgtcatcaaccacaaggactctgtgatcgtgggctcggttgga
tctaatgactggcgtggatctctgtatgaagtgacgggatcaggatctggagtgaaagag
actgagattagagatccgttcgtcagtaaagactcatatatgggttactctgctgtgctg
ggagcgagagccggcgtctcctttctgttctccggggctccgcgagccgaacacatgggt
ctggtgactctcttcatcaagaatgacagcagctggagagtgagctggaacatctcaggg
gaacagattggatcatatttcggagcgtctctgagtctgctggatgtggactctgatgga
gactcagatttcctgctggtcggagctccgctgttccaccagtctcagccgagggcggag
ggcaagctgtacgtctacaccttttctgatgggcccttccagaagatgctgaatgtgagc
gggtcaaacattggcaggttttctgcatctctggcatccctaaaggacctgaatggagac
agcctgtcagatgtggcggtcggggctccgcttgagaacgatggagaaggagtcgtctac
atctacctgggtgacgggatgcgtggcatcaaccttaatcacgctcctcagcggatttcg
ggccggtcggttctgcctggtcttcagcagtttggagtgtctctgtccggccagatggac
atgagcgatgacaacctgacagatgtggtgatcggagcgcgaggagggatggtgctgctc
aaggctcggccggtgatgtctgtatctgtgcagctcagcttcagtcctaatgaaatcaac
ctgaactactttgaatgtccaagtgacaaagtgttgaatgtgtttaatctcacttcatgt
ttcacgatgaaggagcagacgagcagcaacggatcgctcgacaagaagctgaacgtttct
ctggagctgaacgtggacgtgatgagaggaatcaatcgagggttctttgttcagagggat
tcatcatccaaggctctgcagcagctcctcctgctggattctgggatcttctgtcggagc
ttccccgtcttcatgccgggctgtgttgcagacacagtgtctcctctgaagatacgaatg
aatttctctcagagtgagatgtctggaagctctgtggctgttctggatgtctacagcagg
acagaggagtatgtggaggtgccgtttcaaaggaactgtaattccaataacagctgtgtg
gccgatctgaagctggacttcagttttaggaacaacacgttagtggtggcgaatcaagct
catttcacgctcctcatatcgctggagaaccccggcgacgactccttcaacaccagcata
gtgctgcactacccagacggcctctcgctctcaaatttcctgacggttaagcccagccgg
acccgaagcagctgtggtgatcgcgacagcggagcgacaaacagaaccacctgcagcatc
aatctaccagtgtaccgcagcggcactacaactcagtttcaggcaacatttcgagtgtcg
aagtgggattacgactggtccgacatgatggagatgatgatcacggccaacagcgacaac
aatggaaacacgagcgctgcggcggtgaggaggagtgtaccggttcagttcgctgtcgat
gtggccatcagtctatcggctgaagactctgtgacgtacctgaacttctctctggaggac
agaggtccaaaacctctccgcatcgtctacaaggtggagaatctgggtgtaaagggtctg
ccggtgagggtctcgctccacctgccctgtccaactacacctgtgcgtttaagcaaacag
aagttcagcgtgcagcagaactctacagacgtggcgtgcacatcctctgaggacgatcac
tgcgagacgattgagtgttctcagtttcatctggacaaacattcagtcgttcagttcatc
ctgacagcagacgccactttccagagcgtgaaggagtacgagagcaaattttccttccag
gagttgaggaaggatttctccttgaacatcagtgccgagctcaactacaacagaagccgc
tacaaccagacgtccacaggcctgaaggacgaccctcataaatcacagatcacagtgaag
gccgagttcgtccttcctcccaatcgaatgctcatcatcagtgttggtgcagggggcggg
ctcatcttgctcattatcatattcttcctgctggtgaagtgtgggttcttcaagcgtagg
cgtcctgaagagtttccctctcagactgatgatgtatctgctctggagaacagccctgaa
gactctcctctcatggacacagatgctaaagacggtgcaggagtcgctgtgaaggagaac
ggagcgagtgcagacccgacaaacacagaacaataa
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integrated database retrieval system
