Danio rerio (zebrafish): 558395
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Entry
558395 CDS
T01004
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03008
Ribosome biogenesis in eukaryotes
dre03013
Nucleocytoplasmic transport
dre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
558395 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
558395 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
558395 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
558395 (xpo1a)
03009 Ribosome biogenesis [BR:
dre03009
]
558395 (xpo1a)
03016 Transfer RNA biogenesis [BR:
dre03016
]
558395 (xpo1a)
03036 Chromosome and associated proteins [BR:
dre03036
]
558395 (xpo1a)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
558395 (xpo1a)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
558395 (xpo1a)
Pre-60S particles
558395 (xpo1a)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
558395 (xpo1a)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
558395 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Sec7-like_HUS
BspA_v
Motif
Other DBs
NCBI-GeneID:
558395
NCBI-ProteinID:
XP_009292977
ZFIN:
ZDB-GENE-050309-201
Ensembl:
ENSDARG00000078041
UniProt:
E7F0E8
LinkDB
All DBs
Position
1:complement(53656235..53685132)
Genome browser
AA seq
1071 aa
AA seq
DB search
MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDANSV
EKEQVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSTSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQERLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVLQLGRIYLDMLNV
YKCLSENISSAIQSNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGSHITGEIPKIFDAVFECTLEMINKNFEE
FPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTM
LQNIAQEEAAAQSFYQTYFFDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISV
ALNAGTAGNNQGYVQDYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDSTDLFLEEREASLRQAQEEKHKIQLSVPGILNPHELPEEMCE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagacatgaccatgttggcagatcacacagcacgacagttgctggacttcagt
caaaagctcgacatcaatttactggacaatgtggtcaactccatgtactatgatgtggga
tctcagcaaagactggcacaagaagttctcaccaacctgaaggaccatccagatgcctgg
accagagtggacaccatattggagttctcgcagaacatgaagactaaatactacgctcta
cagatactagagacggtgattaaaacacgctggaagattcttccacgaaaccagtgtgaa
ggaattaagaagtatgttgttgggctgataatcaagacttcatctgatgccaacagcgtg
gagaaagagcaggtgtacatatcgaagctcaacatgatcctggtgcagatcctgaagcag
gagtggcccaaacactggcccacattcatcagtgatatagtgggagcgagtcgcaccagt
gagagtctgtgtcagaacaacatgataatcctgaagctgctcagtgaggaggtgtttgat
ttctccagtggtcagatgactcaggtcaaggccaaacacctgaaggacagtatgtgcaac
gaattttcccaaatattccagctatgccagtttgtaatggaaaattcccagaatgcccct
ctggttcatgccacattggagacactccttcgttttctcaactggattcccctgggctac
atatttgagaccaaactcatcagcacgctggtgtacaagtttctgaatgttccgatgttc
cggaacgtcactctgaagtgtctgactgagatcgcaggtgtcagtgtcagtcagtacgag
gagcagtttgtgaacctgttcacactcaccatgatgcagctcaaacagatgctcccgctg
aacacaaacatccgtctagcgtattcaaatggaaaagatgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaagagcacgggcagctgatcgagaagaga
ctaaacctcagagagactcttatggaggccctgcactacatgctgctagtgtctgaggtg
gaggagacggagatcttcaagatctgtctggagtactggaaccatctggctgctgagctc
tatagagagagtcccttctccacatccacatctccactgctctcaaccagccaacacttt
gacgtgccgcctcgtagacacctgtacctacccgtgctctccaaggtgcgtttgctcatg
gtgagtcgcatggccaaaccagaggaggttttagtggtggagaacgatcagggcgaagtg
gtgagagagttcatgaaggacaccgactccatcaacctctacaagaacatgagggagact
ctggtctacttgactcatctggattatgctgatactgagcgtatcatgactgaaaagctt
cacaatcaggtgaatggcaccgaatggtcctggaggaacctgaacacgctgtgctgggcc
atcggctccattagcggagccatgcatgaggaggacgagaagagattcctcgtcacagtc
attaaggacctgcttggtctgtgtgaacagaaaagagggaaggacaacaaggccatcatc
gcctccaacatcatgtacatcgtcggccagtacccacgattcctcagggcccactggaag
ttcctcaagaccgttgttaacaaactctttgagttcatgcatgaaacccatgatggtgtg
caggacatggcatgtgacacgttcatcaagatcgctcaaaagtgcaggaggcattttgtg
caggtgcaggtgggagaggtgatgcctttcattgatgagatcctcaacaacatcaacacc
atcatatgtgacctgcagccgcagcaggtgcacacgttctatgaggccgtgggctacatg
attggcgcgcagacggaccaggccgtccaggagcgcctcattgagaaatatatgctgctc
cccaaccaggtctgggacagcatcatccagcaggccaccaagaatgtggacatcctgaag
gacccggagacagtgcgtcagctgggcagcatcctgaagaccaatgtgcgggcgtgtaaa
gctgtgggtcacccgttcgtcctgcagctgggccgcatttacctggacatgctgaacgtc
tacaagtgcctgagtgagaacatctcctccgccatccagagcaatggtgagatggtgact
aagcagcccctgatacgcagcatgcggacagtaaagagagagactctgaagctcatctca
ggatgggtcagccgctccaacgaccctcagatggttggcgagaactttgttccacctttg
cttgaggcggtcctcattgactaccaaaggaacgttccagctgctcgagaacccgaggtg
ctcagcactatggccaccatcgtcaacaagctcggctctcatatcacaggagagatcccc
aagatattcgatgcagtgtttgagtgcactctggaaatgatcaacaagaactttgaggag
tttcccgagcacagaacgcattttttctacctgctgcaagctgtcaactcccagtgtttc
ccagcattcctgtccatcccaccggcacagttcaaactggttctggactccatcatctgg
gccttcaaacacaccatgaggaacgtggccgacactggtcttcagatcctgttcaccatg
ctgcagaacatcgctcaggaagaggccgcagctcagagcttctatcagacatacttcttc
gacatcctgcagcacatcttctctgttgtcacggatacgtctcacacggccggtctgacg
atgcacgcctccatcctggcctacatgttcaacctagtggaggagggtaaaatcagcgtg
gcactgaacgcaggcacggcgggtaacaatcagggctacgtgcaggactatgtggccaac
ctgctgaagactgccttcccacatctgcaggatgcacaggtgaaggtgttcgtcactggt
ctgttcagcttaaatcaggacattcctgcctttaaagagcacctcagggacttccttgtg
cagatcaaggagtttgcaggcgaggactcaacagatctcttcctagaggagcgggaagcg
tctctccgtcaggctcaggaggagaaacacaaaatccagctctccgtcccaggaatcctg
aaccctcacgagctcccggaggaaatgtgtgaatga
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integrated database retrieval system