Danio rerio (zebrafish): 562480
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Entry
562480 CDS
T01004
Symbol
si:dkey-72l14.3
Name
(RefSeq) Glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00531
Glycosaminoglycan degradation
dre01100
Metabolic pathways
dre04142
Lysosome
Module
dre_M00076
Dermatan sulfate degradation
dre_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
562480 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
562480 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
dre02042
]
562480 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
dre00536
]
562480 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
562480 (si:dkey-72l14.3)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
562480 (si:dkey-72l14.3)
Bacterial toxins [BR:
dre02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
562480 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
dre00536
]
Heparan sulfate / Heparin
Enzymes
562480 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
Enzymes
562480 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
562480
NCBI-ProteinID:
NP_001038450
ZFIN:
ZDB-GENE-060526-332
Ensembl:
ENSDARG00000061044
UniProt:
A0A8M1N9Q8
LinkDB
All DBs
Position
8:complement(25973151..25980807)
Genome browser
AA seq
505 aa
AA seq
DB search
MAGRQRMFILPSLSLTFLYLCFFIPARFCGPSRAPLLAGQPFLVLWGVPDKDCLGRPNPA
AFGMEWEGRVAIFYEDTLGLYPYFTVQDRPVNGGLPQHTSLDLHLQRVEGDLTVSLPQAG
APGLGILRWQEWAPQWNRNRENKAKYLVESRALLRGFFPDWSVEEVEKWSQVDFEAAAQS
IMMETLREVKRLRPQRLWGMAPYPNCYNFDPTQMALANYTGRCPAAEMALNDELMWLWKR
SGALYPVLSLEKLPEGTKGAWLYSTNQIREALRVAALAGTTSDLPVFPMIKIVYTSSNSF
LSEADLVNTIGESAAMGASGVIIWEKSLAVKTQKSCSEFGSYVRQVLGPYSVNVTTAARL
CGVSLCQGRGRCVRKKPEDPTYLHLPSAHFMLIPNGAEGVRATGELPTAYIDLWKKDFRC
QWFEALEGAAADQESGAVLENRRKATSATTTTVKPVVGSSQSQSTVGAVVPVAAVPTKQP
VEGGSSALKTPVVLLFSLALFSFVV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggctggaagacagcgcatgttcatcctcccctccctttctcttacattcctttatctc
tgtttcttcattcctgcacgtttctgtggtccttcccgggcccctctccttgcgggccag
cccttcctggtgctttggggggttccagataaagactgtttgggccggccaaacccagct
gcatttgggatggagtgggaaggtcgtgtggcaatattttatgaagacacgctcggactt
tatccatatttcactgtgcaggatcgtcctgtcaacggaggcctaccacaacacaccagc
cttgaccttcacctccagagggtggagggggacctgactgtctcattaccccaggcagga
gcacctgggctggggattctgcgctggcaggagtgggcacctcagtggaacaggaacaga
gaaaataaagcaaagtaccttgttgagtcgagagctcttctccgaggattttttccagat
tggagtgtagaggaagtggagaaatggtctcaggttgactttgaggcagcagcacagtcc
ataatgatggaaaccctgcgggaggtgaagaggctccgcccacagagattatggggcatg
gctccatatcctaactgctataactttgaccccacccagatggcattagccaactacaca
ggccggtgtcctgcggcggaaatggcccttaatgatgagctgatgtggctgtggaagcga
agcggagccctgtatcccgtcctctcactggagaagctgccagagggcaccaaaggggcg
tggctttattcaaccaatcagatcagagaagctttgagagtggcagctcttgcggggact
acatctgatcttcctgtgtttccgatgatcaaaatcgtttacacttcttccaactccttc
ctctcagaggctgacctggtgaatacaattggagagagtgctgctatgggagcatctgga
gtcattatatgggaaaaatcattagcagttaaaacacagaaatcctgctcagagtttggc
tcatatgttcgtcaggttctcggcccttactcggtcaatgtgaccacagcagcacgtctc
tgcggggtctctctgtgccaaggccgcggacgatgtgtgcgcaagaaacccgaggacccc
acatacctgcatcttccctcagctcactttatgctgatcccaaatggggcagaaggtgtg
cgggccaccggcgagcttcccacagcttacattgacctctggaagaaggacttccggtgc
cagtggttcgaggcgctggagggtgcagcagcagatcaagaatcaggagcagtgctggaa
aacagaaggaaagcaacatcagcgacaacaacaacagtaaagccagtggttggctcgagc
cagagtcagagtacagtgggtgcagtggtaccagtggcagcagtgcctaccaaacagcca
gtggaaggtggaagctcagcccttaaaactcccgtcgtcctcctcttttcgctggctctc
ttcagcttcgttgtgtag
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