Devosia rhodophyticola: PSQ90_00255
Help
Entry
PSQ90_00255 CDS
T09920
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
drp
Devosia rhodophyticola
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drp03009
]
PSQ90_00255 (rimO)
Enzymes [BR:
drp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSQ90_00255 (rimO)
Ribosome biogenesis [BR:
drp03009
]
Prokaryotic type
ribosomal protein modification factors
PSQ90_00255 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
S1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WDR05935
LinkDB
All DBs
Position
49841..51169
Genome browser
AA seq
442 aa
AA seq
DB search
MTQAPKIGLVSLGCPKALVDSERIMTTLRAQGYSFSRDYAGADVVLVNTCGFLDSAKQES
LEAIGEALNENGRVIVTGCLGVEEELIRKTHPSVLAISGPHQYESVVSAVHEHLPPVPNK
FVDLLPEQGLKLTPRHYAYLKISEGCNNRCSFCIIPQIRGDLASRPAAGILGEAEALVRG
GAKELLVISQDTSAYGVDIKYATSNYRGRPVAAKFYDLAKELGELGAWVRLHYVYPYPHV
DQVIHLMAEGKVLPYLDIPFQHASPSVLKTMRRPANQVKTLDRIHKWRAECPDLAIRSNF
IVGFPGETEEDFEFLLDWIEEAEIDRAGCFKYEPVTGAPANELEGIVPDDVMQDRFERLM
EVAQHVSTGQLAKKVGQTIDVLVDDVDKDNNRAIARSKWDAPEIDGQVIVNNATNIKPGD
LVSVLVTDSDEYDLFAEPSQAN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccaaaaattggcctggtcagcctcggctgcccaaaagccctcgtagat
agcgaacgcatcatgacgacgttgcgagcgcagggttattccttcagccgtgactatgcg
ggggccgatgttgttctggtcaatacctgtggcttcctggatagcgccaagcaggaaagt
cttgaggcgattggcgaagcgcttaacgaaaatggccgcgtcatcgttaccggctgcctg
ggcgttgaggaagaactgatccgcaagacccatcccagcgtcttggcgatttcgggaccg
catcaatacgaaagcgtcgtgagcgcggtgcacgagcacctgccgccagtgcccaacaag
ttcgttgatctgttgcccgaacaggggctgaaactgacgccacgtcactacgcctatctc
aagatttcagaaggctgcaacaatcggtgctcgttctgcatcattccccagattcgcggc
gatctcgcttcgcgaccggcggcgggcattttgggcgaggccgaggcccttgtgcgcggc
ggcgccaaggagctattggtcatctcgcaggacaccagcgcctacggcgttgacatcaaa
tatgcgacgtcgaactatcgaggccgtccggttgcggctaaattttacgatctggccaag
gaactgggcgagctgggcgcgtgggttcgcctgcactatgtctatccctacccccatgtc
gatcaggtcatccacctcatggccgagggcaaggtcttgccctatctcgatattccgttc
cagcacgcgtccccgtccgtgctcaagaccatgcgccgccccgccaatcaggtcaaaacg
ctggaccgcatccacaagtggcgcgccgagtgccctgacctcgcaatccgttccaacttc
atcgtcggcttccccggcgaaaccgaggaagatttcgaatttcttctggactggatcgaa
gaggcagagatcgaccgcgctggctgtttcaaatacgagccggttactggtgctcccgcc
aacgaactggaaggcattgtgcccgacgacgtcatgcaggatcgctttgagcgcctcatg
gaggtagcccagcacgtttcaaccggtcagctggccaagaaggttggtcagaccattgat
gttttggtcgacgatgttgacaaggacaacaaccgcgctattgctcgctccaaatgggac
gcgcctgaaatcgacggccaggtcatcgtcaacaatgccaccaatatcaagccgggcgat
cttgtctcggtgctggtgaccgacagcgatgaatacgatctgttcgccgagcccagtcag
gcgaattga
DBGET
integrated database retrieval system
