Desulfohalobium retbaense: Dret_0146
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Entry
Dret_0146 CDS
T00989
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drt03009
]
Dret_0146
Enzymes [BR:
drt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Dret_0146
Ribosome biogenesis [BR:
drt03009
]
Prokaryotic type
ribosomal protein modification factors
Dret_0146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CUT
Motif
Other DBs
NCBI-ProteinID:
ACV67448
UniProt:
C8WZH3
LinkDB
All DBs
Position
189631..190947
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AA seq
438 aa
AA seq
DB search
MAIHDPLRVFTISLGCPKNRVDTEFLLGALGGAYAPAQDITSADVVLINTCAFIEPAVEE
SVQQILEVADDISDLVPRPLLAVTGCLVARYGQDLKAGLPEVDLWLPLAEQDQWGERLAQ
ALGRSFPGGRERILTTGPASAYLKISEGCDHACRFCIIPQLRGPLQSRPVEELVREAGSL
VDQGARELVLVAQDVSNYGQDLGMRQGLQRLVEALSAVPGLDWIRLLYLYPVGVTTELLR
FLRDSAPLVVPSFDIPLQHAHPDILTQMGRPFARDPYRVIATVRDVLPQAALRTSLIVGY
PGEKEAHFAYLRQFVQEVRFHNLGVFPYYAEEGTPAATLPDQVPEAVKNDRREQIMGDQA
QISETILESCQGTTMDVLVERPDPHWPTLFQGRVWFQAPEVDGVTYVSGHSLQAGQLVHA
EIEESKTYDLVALVPEEK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcacgatcccttacgggtgtttacgataagtctcggttgtcccaagaaccgg
gtggacacggaattccttcttggcgccctgggcggggcttatgccccggcccaggacatc
accagcgcggatgttgttttgatcaatacctgcgcctttatcgagccggcggtcgaggag
tcggtgcaacaaattcttgaagtggcggatgatatcagtgatctggtgccgcgccccctg
ttggcggtcaccggctgtctggtggcccgttatgggcaggatctgaaagccgggttgccg
gaagtggatctctggcttccccttgccgagcaggaccagtggggtgagcgcctggcccag
gcgctggggcgttcgtttccgggggggcgtgaacggatcctgactaccggcccggcatca
gcctacctcaaaatcagtgaagggtgtgaccacgcctgccggttttgcattatcccccag
ttgcgcggcccgctccagagcagaccggtcgaagaactggtccgtgaagcgggttcgctg
gttgaccaaggggcgcgtgaactcgttctcgtggcccaggacgtgtccaattacggccag
gacctggggatgcgtcaagggctgcagcggctggtggaagcgctgtcggcggtgccggga
ctggactggatccgcttgctctatctctatcccgtgggcgttaccacggagttgctgcgc
tttttgcgtgacagcgcccccctcgtcgtcccttcctttgatatcccgctgcagcacgcc
catccggatatcctgacccagatgggccgtccttttgccagagacccgtatcgggtgatt
gcaacggtccgggatgttctgccacaggcggcgctgcgaacgagtctcatagttggttat
cccggggaaaaagaagcccatttcgcgtatctgcgtcagtttgtccaagaggtgcgcttc
cacaatctcggtgtcttcccctattacgcggaggagggaacgcctgcagcgacactgccg
gatcaggttcccgaggcggtcaagaacgaccgacgcgagcagatcatgggtgaccaggcg
cagataagcgaaacgattctcgagagctgtcagggaaccaccatggatgtgctggtggag
cgaccggatccgcactggccgaccctgtttcagggccgggtctggttccaggcgccggag
gtggatggcgtgacctatgtcagcgggcacagtcttcaggccggccaactggtgcacgcc
gagatcgaggagagcaagacgtatgaccttgtggcgcttgtcccggaagaaaaataa
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