Desulfovibrio subterraneus: LN040_10250
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Entry
LN040_10250 CDS
T08953
Name
(GenBank) hypothetical protein
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00360
Phenylalanine metabolism
dsb00362
Benzoate degradation
dsb00621
Dioxin degradation
dsb00622
Xylene degradation
dsb01100
Metabolic pathways
dsb01120
Microbial metabolism in diverse environments
dsb01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
LN040_10250
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LN040_10250
00622 Xylene degradation
LN040_10250
00621 Dioxin degradation
LN040_10250
Enzymes [BR:
dsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
LN040_10250
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
MptE-like
AP_endonuc_2
CST-I
Motif
Other DBs
NCBI-ProteinID:
WBF66110
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All DBs
Position
2280684..2282393
Genome browser
AA seq
569 aa
AA seq
DB search
MNLNKPFEILDCSIRDGGYVNNWDFSQVLVRESYKALSKTGVDFVELGFRSSEKYFPKNT
TGIWRTTPEDLLRETVGNIQGPAIALMGDYGKIDLEDLPPAEESVARMIRIAAGKNDLAG
ALDLCEKIKQKGYISSLQCMGYICFTENERKELIKRLADTDIDYAYVGDSYGSIFPFHVR
PIFEPLLELKHLKIGFHPHNNTQMAFASTIEALAVGIDIVDSTIFGIGRGAGNLPTEILL
GYLRVQGMERYNPSPVLNVIERYFLDIMRKTPWGYQLPYMISGIFNVHPNYPKELMKRQE
YRMDEIWNAMSYIRKLNPTGFNPRLVDELIGQGVVGYMGAKHFCVPGEERENCIPAPHPP
YQDRHAGKDILILANGPSLKEKQEEIRQFIKLHKPIVLGANNLGGLFVPDYHAFNNAKRF
VSHIETVHPDSSLLLGINLPGDLIDDYLDRPYEPLVFNDILDADFDITNGMISSNCRTIS
VLLAGVAVVMGARRIFIAGMDGYLNSDTTLHYDERFDTHEHALNIERHRWNERFLHQIDA
WLTRRQHEGLHIITPTGHSSFYTPITEYL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaacaagccttttgaaattcttgattgttccatccgcgacggcggctacgtc
aacaactgggacttctcgcaggtacttgtccgcgagtcctacaaggccctgtccaaaacc
ggcgtggatttcgtcgagctcggcttccgcagctcggaaaagtatttccccaaaaacacc
accggcatctggcgcacaacgcccgaagatctgctccgcgaaaccgtgggcaacattcag
ggaccggccatcgcccttatgggcgactatggcaaaatagaccttgaagacctgcccccg
gcagaagagtccgtggcccgcatgatccgcattgcagcaggcaaaaacgatcttgccggt
gctctggacctgtgcgaaaaaatcaagcagaagggctatatctcctccctgcagtgcatg
ggctacatctgcttcacggaaaacgaacgcaaggaacttatcaagcgccttgccgatacg
gacatagactacgcctatgtgggcgacagctatggttccatctttcccttccacgtgcgg
cccatatttgaaccgctgctggaactgaagcatctgaagatcggcttccacccccacaac
aacacgcagatggcctttgcaagcaccatcgaggcgctggccgtaggcatagatattgtg
gattccaccatcttcggcatcggccgcggcgcgggcaacctgcccacggaaattctgctc
ggctacctcagggtgcagggcatggaacgctacaatccctcgcccgtgctgaacgtgatt
gagcgctatttccttgacatcatgcgcaagacgccgtggggctaccagctgccgtacatg
atttccggcatcttcaacgtacatcccaactaccccaaggaactgatgaagcggcaggaa
taccgcatggacgaaatctggaacgccatgtcgtacatccgcaagctcaaccccacggga
ttcaaccccagactggtggacgaactcatcggtcagggcgttgtgggctacatgggtgcc
aagcacttctgcgtgcccggtgaagaacgcgaaaactgcatccccgcaccgcatccgccc
tatcaggaccgccatgcgggcaaggatattctcattctcgccaacggccccagcctgaag
gaaaagcaggaagaaatccgccagttcatcaagctgcacaagcccattgtgctcggtgcc
aacaacctcggcggcctgtttgtgccggactaccatgcgttcaacaacgccaagcgtttt
gtctcgcacattgaaaccgtgcatccggattccagcctgctgctcggcatcaacctgccc
ggcgacctgatagacgactatctcgaccgcccgtacgaaccgctggtgttcaacgatatt
ctcgatgccgacttcgacatcaccaatggcatgatctcctccaactgccgcaccatctcg
gtgctgctggcaggtgtggccgttgtcatgggtgcccgcagaatcttcattgcaggcatg
gacggctacctgaacagtgacaccacgctgcactatgacgaaagatttgatacgcacgaa
catgcgctcaacatagaaaggcaccgctggaacgaacggttcctgcaccagatagacgca
tggctcaccagaagacagcatgaggggctgcatatcatcacccccacaggccattcttct
ttctacacccccataaccgaatacctgtaa
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