Desulfovibrio subterraneus: LN040_13645
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Entry
LN040_13645 CDS
T08953
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00860
Porphyrin metabolism
dsb01100
Metabolic pathways
dsb01110
Biosynthesis of secondary metabolites
dsb01240
Biosynthesis of cofactors
Module
dsb_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LN040_13645
Enzymes [BR:
dsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
LN040_13645
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GFIT
Motif
Pfam:
AsnC_trans_reg2
HTH_24
HTH_AsnC-type
HTH_Crp_2
MarR
Motif
Other DBs
NCBI-ProteinID:
WBF66758
LinkDB
All DBs
Position
complement(3121449..3121928)
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AA seq
159 aa
AA seq
DB search
MVKTTFTDIEKKILHIVQADLPDSLTPYADIAKEVGTDEATVLNLINQMKDEGTIRRFGV
SLKHQKAGYSHNAMVSWIIDEDRVDAAGEQAAKHPLISHVYYRPSSHPEWPYTLYTMIHG
RHENEYREVIEQLRQETELEVFAVLSSLKELKKISMTYF
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaccacgttcacggatatcgaaaagaaaatcctgcacatcgtgcaggccgac
ctgcctgacagcctcaccccctacgcggatatcgcaaaggaagtgggtaccgacgaagcg
accgtgcttaacctcatcaaccagatgaaggacgaaggcaccatccgccgcttcggcgtg
agcctgaaacaccagaaggcgggctacagccacaacgccatggtgtcatggatcatcgat
gaagaccgcgtagacgctgcgggcgaacaggccgccaagcatccgctcatctcccacgta
tactaccgcccgagctcacaccccgagtggccctatacgctctacaccatgatccacggg
cggcatgagaacgaataccgcgaagttatcgaacagttgcgtcaggaaaccgagctggag
gtctttgccgtgctcagctccctgaaggaactgaagaaaatttccatgacctatttctaa
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