Drosophila sechellia: 6608717
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Entry
6608717 CDS
T01064
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
dse
Drosophila sechellia
Pathway
dse03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6608717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6608717
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6608717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
ATG16
Tup_N
Motif
Other DBs
NCBI-GeneID:
6608717
NCBI-ProteinID:
XP_032570256
LinkDB
All DBs
Position
2R:8012846..8021145
Genome browser
AA seq
2344 aa
AA seq
DB search
MDLSGPQALNNILQPDELKLVPEDIQQKLSAYINNFSDEYCKNRAAANRLAEAEQKSEEL
ENKMEDYLVKFTSFELNVNELRTHLDQMSSERANLMDTITKGEQTISQLRKEKSSIVEER
DSLMKVIERQQAELERLKQDLHTYQQQLSSAIAAKCEAIARVDEIQSKEVALELKENRME
SERDMLQKEILLISGDLNKSNAELQNIRREHSLNTMQLESRLNEKTESLKLMQEQYEQAV
KTIGELTRKVEIQNDTAFKQNQATEEYVGKLKNELDAKEKLFEIFKSTESDHLVQREELL
QGISEIKRLLEEAEEQCAQLEEQKEIMQQKHNAELEEQNKRIKDMERELASANDLIKEVR
ENNLETAICQLAPSAAVASRIMRSDLSFTELYSMYAKNSEELEMRNREIQQLKLQLKSII
AEVSESAPVMEKQKSDYQKMKETNSELLREHDELLENKLYLERELERALSTLNHNQNENK
KLKQTHTDLSRQVCMLLDELNCIRAGVKHVRNQPTRQTTTSESVINDNLVTFSSIEELVE
RNTYLLNMSRDLTQLLEASEKNQDKVMLEQSKNHIRKLEVRFAELEDLLTQKNNTVTTLL
SKCDRYKKLYFAAQKKLGQNTVDMDDSNLDPNDSVLDTSEQPAANSEENRKLEMRVRHLE
QQLEGEVKKYASLKENYDYYTSEKRKNDALAQEQFDSMRNEVRELTSSNCKLMNTTEFQK
EQIELLHKHIATYKQQVSTLEERTKNYEKTIIKHEQTVHLLKDEVMTAHRKHAAADAEAQ
SLRQENRILRDTSSRLQIEKETYHREQQSQSLLLNSLEFIKTNLERSEMEGRQRLEQRLD
DTVRELAAQRRHFKEEEEKFRESINEFKRQAETAIKLKDEEKQQADKWQAELINVREELA
QKVNKVNELSKKLQEVLTPTLNDNPITAANKRAREFELKLDQATVEIESLTKELAKTREH
GEQFYKMSQSAENEIKRLHELHGELVAKQEEEIKKLRSSEAELKTRISDLEAEAMLSNVT
EQSKTVDQSGQLKSAQDDLKSLLEKLTEANCTIRTLRSENTSLVESLNAVEVKYANGMIQ
HSADIQELTRYKAEFFKANDELNQLKSGRESLQTAYDELLRSNVEAQKLLDKEREESEKR
VADLHALNSNLHDQIEALASKLAVLASQSQNPNSSLNESAMDADQSLNASGLTAAEEGRN
NEQLLKIIKFLRKEKDLYAAKLDILKAENARLISEHAIQQKKVDELNGYLNQERAKSQTD
VVSANKHEEVLRKIETLNAITDSNRILREERNALTLRVAELTDRISTVEKELFPLQCSNK
ELTSKIEEINVENTSLRTEAIKWRQRANALVEKSNRNPEEFKRLQAEREHLAKLLTAEKE
LNKKQSDELTVLKQRMNTEIPMLNKQMQLLDEARKKQVDEFTNLKQNNTRQTQDIMELKN
RLLQKEEELLKANEELETKDKTIADKETKEIQLRKLAKRYKDFYIGLQAQGGGTESSAEL
EKVRSELEEVNNQLRALKDEHEKVTKECDEVKKRTEPETETSAIRQEYKAKLDKLVVDLT
VARTDLVNQETTFAGTKSSYDETIARLEKELQENIAANKDINLRLTRENESLHMRINQLT
RQLGSQQSTKPSTSSVAEKGNISESSPRTANVKPMSGSATVQQSATVTPWRGGETPLASI
RPISVQNSRTAAILPTSQQPPAGSSTSTSSSSSSSSTSTTSAASGGSSAVAQTALVPPQQ
QVHTTGSAALESMASSSPTSSHTDYMPSTSSASVAVAAIPPMGASSAAESSQEAESIQHP
QQNDSQLFVGGAQQQVVALVSPRVEGSSSSSSSTSVPTATAPSVQDGGSQSQQPSTSGSS
SSSSTVVSSHSRHTPSSSNVTTTQAGCSSQAIKRPRDIEGDSSTTTEEGVPEKMSKMTKR
LRGPMHSGELSAGHIGDSGMDVDQMPTSSQRDQEDDIQVDSDDEEDVLADADDGPIDGGE
AEQEGYEDSYEQDNEMDDNEGGDDDNDIAVDAQDNNEVDIEVPEQHMQAQEESQSLDNQA
IATASASTQENNQSQAITSGSGESSNPVTLPQAEASNWKQAAASTSTAAARRNESSVEIV
SSPQVSNFCEQPARLESADVDGTAEVAGGAPHESAGPSDAGAASASSPQKQSEAGESSGS
DALKAADEGDHADGAENASEADEAFAEETMATGQGEDSQPLGNDNPNVGTSQSEVSQNQS
NLGEGNPTEDSEGADGVSSEGEKQAVGVEEEGREAEATSPSENTRFRTLRSAVPTRRGHR
AMRGGSPNSQNRPQRIVWQRDTSPGNIQQNQMSANNNRFAQRARNRRPIRRPSPNNFNNG
GRFP
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atggatctcagcggtccacaagctctgaacaacatacttcagcccgacgagttgaaactc
gtgccggaagacatccagcagaaattgtcggcgtacattaacaatttctcagatgagtac
tgcaagaaccgtgcggccgccaatcggttggccgaagccgagcagaaaagcgaagagctg
gagaacaaaatggaggactatctagtcaaatttaccagctttgagttaaatgtaaacgag
ctgcgcactcatctagatcagatgtcttcggaacgagctaacctaatggatacgatcacc
aaaggcgagcaaacaatatcacagttgcgcaaggagaagtcctcgatagttgaggaacgc
gattcactgatgaaggtaatcgagcgccaacaggcggagctggaacgattgaagcaggat
ctgcacacctaccagcagcagctaagcagcgcgattgccgccaagtgcgaagccattgct
cgcgtggacgaaattcaaagcaaggaagtggctctggagctcaaagagaaccgcatggaa
agcgaacgcgatatgctgcaaaaggagattttgttaatcagcggagatctcaacaaaagc
aacgccgagttgcagaacatccgacgggagcactcactaaacaccatgcagctagagtct
cgccttaatgaaaaaaccgaatccctaaagctgatgcaggaacagtacgaacaggccgtc
aagaccatcggggaactgacccgcaaggttgaaatccaaaacgacaccgccttcaagcag
aaccaggcaacggaagagtatgtggggaagcttaaaaacgaacttgatgccaaggaaaag
ctgtttgaaatctttaagagcaccgaatccgatcatctggtccagcgtgaggaactcctg
cagggcatctccgaaattaaacgtttgttagaggaggccgaggagcagtgcgcccagttg
gaagagcaaaaggaaatcatgcagcaaaagcacaacgctgagttggaggagcaaaataag
aggattaaggatatggaacgggagctagcaagtgccaacgatttgataaaagaggtccgg
gaaaataatttagaaaccgccatatgccagttggcccccagtgcggctgtggctagtcgc
attatgcgctccgatctatcgtttaccgaactttactccatgtacgccaaaaacagcgaa
gaactggagatgcgaaatcgcgaaattcagcagttgaagttgcagctcaagtcgatcatt
gctgaggtctcagagagtgccccggttatggaaaaacagaaatccgattaccaaaaaatg
aaggagactaacagtgagctcttgcgcgagcatgatgaattattagaaaataagttatac
cttgagcgggaattggaaagggctttatctacccttaatcacaaccaaaatgaaaataag
aaactaaaacagacgcacaccgatctcagccgacaggtgtgcatgttgctggacgaatta
aactgcataagggctggagtgaaacatgtacgtaaccaaccaactcgtcagacaaccacc
agcgaaagtgtgatcaacgataacttggtaacctttagttctattgaagagttggtggaa
agaaatacatacctcctgaatatgtcccgggacctcacacaacttttagaggctagcgaa
aagaaccaagataaggtcatgttggagcagtctaagaatcacataagaaagctcgaagtg
cgttttgcagaattggaggatttattgacgcaaaagaacaatacggttactacattgcta
tctaagtgcgaccgctacaagaagttatatttcgcggctcagaagaagctgggtcaaaat
actgtggatatggacgactccaatctggatcctaacgactctgtacttgatacttcagag
cagccggcagccaattctgaggagaacaggaaactggaaatgagggtgcggcatctggag
caacagttggaaggggaggtcaagaagtacgcctcactgaaagagaactacgactattac
actagcgaaaagcgtaaaaacgatgcactggcccaagaacagtttgattctatgcgtaat
gaggtgcgggagctaaccagcagtaactgcaagctgatgaacaccactgagttccagaaa
gagcaaatcgaactgcttcacaaacatatagccacctacaagcagcaggtgtctacattg
gaagagcgtaccaagaactatgaaaagaccattattaaacacgagcaaaccgtacatttg
ctcaaggacgaagtgatgaccgcacaccgcaagcacgcagcagccgatgcagaggctcaa
agcctacgccaagagaatcgcattctaagggacacatcttctcgactgcagatcgaaaag
gagacttatcaccgcgagcagcagagccaatcactgcttctaaacagtttggaattcata
aagaccaaccttgagcgatctgagatggagggccgtcagcgtttagagcagcgtttagat
gacactgtacgggaactggctgctcagcgtcgtcacttcaaggaggaggaggagaagttc
cgtgaatcaattaacgagtttaagcggcaggcggagacggccatcaagttgaaagatgaa
gagaagcagcaggcagataagtggcaagcggagcttatcaacgtccgcgaagaacttgct
cagaaggtcaacaaggtcaatgaattaagcaaaaaacttcaggaagttctgacgcccact
ctaaatgacaaccccatcactgcagctaataaacgagcccgagagttcgaacttaagctg
gaccaggccacggtggagattgagtcactcactaaagagttggcaaagactcgtgagcat
ggcgagcagttctataagatgtctcaaagcgccgaaaatgagatcaagcgtctgcacgag
cttcacggcgagttggtggccaagcaggaggaggaaatcaagaagcttcgcagttcagag
gctgaactgaagacccgtataagcgatttggaagcggaggccatgttgtccaatgtcacc
gagcagagcaagactgtcgaccagtcgggtcaattaaagtcagcccaggacgatctaaag
agcttgctagagaagcttacggaagctaattgcaccattcggacgctgcgttccgaaaac
acgagcctggttgaatctcttaatgctgtggaggtgaagtatgctaacggaatgatacag
cattctgcagatattcaggagctaacccgttacaaggccgaattcttcaaagccaacgac
gaactcaaccaattaaagtcaggtcgggaatcattgcaaaccgcatacgatgaacttctg
cgttcgaatgtcgaggcccaaaagctgctggacaaggagagggaggagtcagagaagaga
gtggctgatttgcatgcattgaactccaacttacatgatcaaatcgaagcgctggcctcg
aaactggctgttctggccagtcaaagccaaaacccgaactcttccttgaatgagtctgca
atggatgcagatcagagcctaaatgcttctggactaaccgctgccgaggaaggaaggaac
aacgaacagctactaaagatcataaagtttttgcgcaaggagaaggatctgtacgctgcc
aagctggacattctcaaggcggaaaatgctcgtctgatttcagaacacgccattcaacaa
aagaaggttgacgaactgaatggctatctgaaccaagagcgcgcaaagagccagacggac
gtggtgtcggccaacaaacacgaggaggtgctacgcaagattgaaactctgaatgccatc
accgatagcaaccgcattttgcgagaggagcgtaacgctttaactcttcgcgtcgccgaa
ctcactgatcgtattagcaccgtggaaaaggaactgttcccgctgcagtgcagcaacaag
gaactgacatcgaagatcgaagagattaatgtggagaacacctcgctccgcaccgaggca
atcaagtggcggcagcgtgctaatgcgctggtggagaagagcaatcgcaacccagaggag
ttcaagcgtctgcaggctgagcgcgagcacctggccaagttgctgactgccgagaaagag
ctaaacaagaaacaatcggatgagctgactgtgctaaagcagcgcatgaatacagagatc
ccaatgctgaacaaacaaatgcaacttctagacgaggcgcgcaagaagcaagtggacgaa
ttcaccaatctcaagcaaaacaacacacgccagacgcaggatatcatggaattgaagaac
cgactactgcaaaaggaggaagagctgttaaaggccaacgaggagttggagacgaaggac
aagaccattgcagataaggaaaccaaggagatacagcttcgtaaactggccaagcgctac
aaggacttctatataggccttcaagctcaaggtggtggaaccgaatcgtcagcggaactg
gagaaggttcgcagcgagttagaggaagttaataatcaactacgggcgcttaaagatgag
cacgaaaaggttaccaaagaatgtgatgaagtcaaaaagcgcacagaaccagaaactgaa
accagtgccatacgacaggaatacaaggccaagttggacaaacttgtagtagaccttaca
gtggctcgtactgatttggtcaatcaagagacaacttttgctggcaccaaatcctcctac
gacgagacaattgcccgtttagagaaggagctgcaggagaacatagccgccaataaggac
atcaacctgcgcctcacccgcgagaacgaatcgctgcacatgagaattaaccagctaacc
cgtcagctgggatctcagcagtcaaccaagccctcgaccagctcggttgccgagaagggc
aatatctcggagagctctccacgaactgctaacgtgaaaccaatgtctggttcggcaacg
gtgcaacaatcggccaccgtaactccctggcgtggtggggagactcctttggccagcata
cgtcctatttcggtgcaaaacagccgcacggccgcgattctacctacgagccaacagccc
ccggcaggatccagtacgtccacctcctcgtcatcatcgtcttcatccacttccacaaca
tccgccgctagcggcggcagctccgcggtagcccaaaccgctttggtgccaccacagcaa
caggttcacaccactggaagtgccgccctggaatcgatggcatcatcctcacccacttcc
tcacataccgattatatgccgtccactagctctgcatccgtggccgtcgctgctattccg
ccgatgggcgcctcatctgctgccgaaagttcccaggaggcggaaagtatccagcacccg
cagcagaacgattcgcagttgtttgtaggcggagcccaacagcaagttgtggcgctagtg
tcgccgcgtgttgaagggtcatcttcatcatccagttccacgtctgtcccgactgccact
gctcccagtgtccaggatggcggaagtcagagccaacagcccagcacttctggcagcagt
agcagctcctccacagtggtgagtagccacagcagacacaccccgtccagcagcaatgtg
acgaccacccaggctggatgctcctcacaagccattaagcgtcctcgtgacattgagggt
gactcctccaccaccactgaggagggtgtccccgagaaaatgtcaaaaatgactaagaga
cttcgcggtcccatgcacagcggagagctatcggccggccacattggtgattccggaatg
gatgtcgatcaaatgccaacctcctctcagcgcgatcaggaggatgacattcaagttgac
tcagacgacgaggaggacgttctggccgatgccgacgatggtcccattgacggaggcgag
gccgaacaggagggctacgaagactcgtacgagcaggacaacgagatggatgacaacgaa
ggtggtgacgatgacaatgatatagctgtggatgcccaggacaacaacgaggtggacatc
gaagtgccggagcagcacatgcaggctcaggaagagagtcaatcgctggacaaccaggca
attgcaactgcatccgcttccactcaggagaacaaccagagtcaggccatcaccagtggc
agtggagagtcatcgaacccggtgactctacctcaggctgaggcctccaactggaagcag
gcagctgcctcaacgtccacagcagccgcccgacgcaacgaaagctctgtggagattgta
agttcccctcaagtctcgaatttttgtgagcaacctgcccgcttggagtccgctgacgtc
gatggcaccgccgaggtggccggcggcgcgcctcatgaaagcgctggccccagcgatgcg
ggagctgcctcggccagttctccgcaaaaacagagcgaagcaggggagagcagcggaagc
gacgcccttaaagctgctgacgagggtgatcatgctgacggagcagaaaacgccagcgaa
gctgatgaggcattcgccgaggagacaatggctactggccaaggagaagactctcagccg
ctaggaaacgataatccaaatgtgggcactagccaatcggaggtgtcccaaaaccaatcc
aatcttggcgagggaaaccccaccgaggacagcgagggagccgacggcgtctcctccgag
ggtgagaagcaggcggtgggtgttgaggaggagggtcgcgaggcggaggccacttcgccg
tcggagaacacgcgatttcgcacgctgcgtagtgcggtgcccacccgacgaggacatcgc
gccatgaggggtggcagtcctaacagccagaaccggccgcagcgaattgtctggcagcgg
gacacgtcgccgggaaacattcagcaaaaccagatgtcagccaataataatcgctttgcg
caacgggcccgcaaccggcgtcccattcgtcgtccgtctccaaacaacttcaacaacgga
gggcgattcccttag
DBGET
integrated database retrieval system