Dinoroseobacter shibae: Dshi_1375
Help
Entry
Dshi_1375 CDS
T00612
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00330
Arginine and proline metabolism
dsh00480
Glutathione metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh04148
Efferocytosis
Module
dsh_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Dshi_1375
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Dshi_1375
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Dshi_1375
Enzymes [BR:
dsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Dshi_1375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ABV93117
RoseoBase:
Dshi_1375
UniProt:
A8LJ95
LinkDB
All DBs
Position
1428663..1429859
Genome browser
AA seq
398 aa
AA seq
DB search
MEMTMNAYVTGLARSRPLAPIETVESRLRGFIDGRIFDRPTLVLDCDAVVAKYHALAHGL
GQGTLIHYAMKANPAPEILRALAAEGCGFDAASRGEIELALAAGATAARISFGNTIKRPS
DIAFAHAHGIDLFAADAEAELDKIAAHAPGARVFLRVLVGATGADWPLSRKFGCAPDTAL
RLMDRAAFLGLRPVGLSFHVGSQTRDPGMWSDTLDQMAEIWHAGRARGHDLNLINIGGGF
PAFYGDPILEAETYAGRVGALVRARFGDATVMAEPGRGLVAEAGMIVAEVLLVSRKSEDD
LCRWVYLDIGKFSGLAETMEEAIRYQFVTPHDGGETGPCIMAGPSCDSADVLYEQRPVHL
PMALQSGDRILIKATGAYTTTYSSVGFNGFPPLDLIVI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaccatgaacgcttacgtaaccgggctcgcccgttcccgtccccttgcaccc
atcgaaaccgtggaatcgcgtctgcgcggcttcatcgacggccggatcttcgaccgtccg
acgctggtgctcgactgcgatgcggtggtggcgaaataccacgcgctggcgcatggcctg
gggcaggggacgctgatccattacgcgatgaaggccaacccggcgcccgagatcctgcgc
gcgctggcggccgaggggtgcggcttcgacgcggcctcccgcggcgagatcgaactggcc
ctggccgccggggccaccgcggcgcggatctcctttggcaacacgatcaagcgtccttcg
gacatcgccttcgcccatgcccacgggatcgacctctttgcggccgatgccgaggccgag
ctggacaagatcgccgcccatgcgccgggcgcgcgggtcttcctgcgtgtgctggtgggg
gcgaccggggccgactggccgctgtcgcgcaagttcggctgcgcgcccgacaccgccctg
cgcctgatggaccgcgcggcgtttctcggcctgcgcccggtgggcctgagcttccacgtg
ggctcccagacccgcgatcccggcatgtggtccgacacgctcgaccagatggccgagatc
tggcacgcgggccgcgcccggggccatgacctcaacctgatcaatatcggcggcggcttc
ccggcattctacggcgatccgatcctggaggccgagacctatgccgggcgcgtcggcgcg
ctggtgcgggcgcggttcggcgatgccaccgtgatggcggagccgggccggggtctggtg
gccgaagcgggcatgatcgtggccgaagtgctgctggtgtcgcgcaaatccgaggacgat
ctgtgtcgctgggtgtacctggatatcggcaagttctcgggtctggccgaaaccatggaa
gaggcgatccgctaccagttcgtcaccccccatgacggcggcgaaaccggcccctgcatc
atggccggtccctcctgcgacagcgccgatgtgctctacgagcagcggcccgtgcacctg
cccatggcgctgcaatcgggcgaccgcatcctgatcaaggccaccggagcctacaccacc
acctattccagcgtgggcttcaacggcttcccgccgctcgatctgatcgtgatctga
DBGET
integrated database retrieval system