Dinoroseobacter shibae: Dshi_2060
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Entry
Dshi_2060 CDS
T00612
Symbol
acnB
Name
(GenBank) aconitate hydratase 2
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00020
Citrate cycle (TCA cycle)
dsh00630
Glyoxylate and dicarboxylate metabolism
dsh00640
Propanoate metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01120
Microbial metabolism in diverse environments
dsh01200
Carbon metabolism
dsh01210
2-Oxocarboxylic acid metabolism
dsh01230
Biosynthesis of amino acids
Module
dsh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dsh_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Dshi_2060 (acnB)
00630 Glyoxylate and dicarboxylate metabolism
Dshi_2060 (acnB)
00640 Propanoate metabolism
Dshi_2060 (acnB)
Enzymes [BR:
dsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
Dshi_2060 (acnB)
4.2.1.99 2-methylisocitrate dehydratase
Dshi_2060 (acnB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase
Aconitase_B_N
Motif
Other DBs
NCBI-ProteinID:
ABV93797
RoseoBase:
Dshi_2060
UniProt:
A8LPU3
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All DBs
Position
2178310..2181102
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AA seq
930 aa
AA seq
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MSLYTAYLEEIAARKEQGLQPKPIDDAALTSEIIAQIKDPAHEHRADSLQFFIYNTLPGT
TSAAGAKAQFLKEIILGESVVAEITPDFAFELLSHMRGGPSVEVLLDIALGDDASLAAQA
AEVLKTQVFLYEADTDRLKAAHEAGNAVATGILQSYARAEFFTTLPEIEDEIEVVTYIAA
EGDISTDLLSPGNQAHSRSDRELHGKCMISEAAQKEIEALKLQHPGKRVMLIAEKGTMGV
GSSRMSGVNNVALWTGKQASPYVPFVNIAPVVAGTNGISPIFMTTVGVTGGIGIDLKNWV
KKVDGDGNPILNNDGNPILEQKYSVDTGTVLKIDTKARKLMSADGGEELADVSSAFSPQA
VEFMKAGGSYAVVFGKKLQTLAAETLGVEPTPVFAPAKEISHEGQGLTAVEKIFNANARG
VTPGKVLHAGSDVRVQVNIVGSQDTTGLMTSQELEAMAATVLSPTVDGAYQSGCHTASVW
DLKAQANTPRLMAFMHKFGLITARDPKGVYHSMTDVIHKVLNDITVSDWDIIIGGDSHTR
MSKGVAFGADSGTVALALATGEATMPIPESVKVTFKGKMADHMDFRDVVHATQAQMLAQH
GDNVFQGRVIEVHIGTLLADQAFTFTDWTAEMKAKASICISNDDTLIESLEIAKQRIQVM
IDKGMDNDVQMLAGLIAKANARIAEIRSGEKPALKPDDTARYFAEVVVDLDQIVEPMIAD
PDVHNADVSKRYTHDTIRPISYYGAEKKIDLGFVGSCMVHKGDVKIVAQMLRNLEKANGE
VKFKAPLVLAAPTYNIIDELKEEGDWDVLQKYAGFEFDDSAPKEKARTEYENILYLERPG
CNLCMGNQEKAAKGDTVLATSTRLFQGRVVADSETKKGESLLGSTPVVVLSAILGRTPTV
EEYKTAVEGINLTKFAPPLTPPIDAKSVHF
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtacacagcctatctcgaagaaatcgccgcgcgcaaggaacaaggcttgcaa
cccaagcccatcgatgacgccgccctgacgagcgaaatcatcgcccagatcaaggatccc
gcgcatgaacatcgcgcggactcgctgcaattcttcatctacaacaccctgcccggcacc
acgagtgcggcgggggcgaaggcgcaattcctcaaggagatcatccttggcgagtcggta
gtggccgagatcacgcccgatttcgccttcgagcttctgtcgcacatgcgcggcgggccc
tcggtcgaagtgctgctcgacatcgcactcggcgatgatgccagcctcgccgcccaggcg
gcggaggtcctcaagacccaggtgttcctctatgaggccgataccgaccggctgaaagcg
gcccatgaggccggcaacgccgtggccaccggcatccttcaaagctacgcccgggcggag
ttcttcaccacgctgcccgagatcgaggacgagatcgaggtcgtgacctatatcgccgcc
gagggcgatatctccaccgacttgctctcccccggcaaccaggcacactcgcgctcggac
cgggaactgcacggcaaatgcatgatctccgaagccgcccagaaagagatcgaggcgctg
aagcttcaacatccgggcaagcgcgtcatgctgatcgccgagaagggcaccatgggcgtg
ggctcgtcgcgcatgtccggcgtgaacaacgtggcactctggaccggcaaacaggccagc
ccctacgtgcctttcgtcaacatcgcccccgtggtcgcgggcaccaacggcatctccccg
atcttcatgaccaccgtcggcgtgaccggcgggatcggcattgatctgaagaactgggtg
aagaaagtcgatggcgacggcaacccgatcctgaacaatgacggcaacccgattctggag
cagaaatactccgtcgacacgggcaccgttttgaagatcgacaccaaggcgcgcaagctg
atgagcgccgatggcggcgaagagctcgcggatgtctcctccgcgttcagcccgcaggcc
gtcgagttcatgaaggccggcggctcttatgccgtggtcttcggcaagaagctgcagacg
ctcgccgctgaaacgctgggcgtggagccgacgccggtctttgccccggccaaggaaatt
tcccatgaaggccagggcctgaccgccgtcgaaaagatcttcaacgccaatgcccgcggc
gtcaccccgggcaaggtgctccatgcgggctcggacgtgcgggtgcaggtcaatatcgtc
ggctcccaagacaccaccggcctgatgacctcacaggagctggaagcgatggccgccacg
gtgctgtcgccgacagtggacggggcataccagtcgggctgtcacaccgcctcggtctgg
gacctcaaggcgcaagccaacaccccgcgcctgatggcgttcatgcacaagttcgggctg
atcaccgcgcgcgaccccaagggcgtctatcactcgatgaccgacgtgatccacaaggtc
ctgaacgacattactgtcagcgactgggacatcatcatcggcggcgacagccacacgcgc
atgtccaagggcgtggccttcggcgccgacagcggcacggtggcactcgcactcgccacg
ggcgaggcgaccatgccgatcccggagtcggtcaaggtgaccttcaagggcaagatggcc
gatcacatggacttccgcgacgtggtccacgccacccaggcgcagatgctggcccagcac
ggcgacaacgttttccagggccgggtgatcgaggtgcatatcggcacgctgctggcggac
caggccttcaccttcaccgactggaccgccgagatgaaggcaaaggcgtcgatctgcatc
tccaacgacgacacgctgatcgagtccctcgaaatcgccaagcaacggatccaggtgatg
atcgacaagggcatggacaacgatgtgcagatgctcgccgggctgatcgccaaggccaat
gcgcgcatcgccgagatccggtcgggcgaaaagcccgccctgaaacccgatgacaccgcc
cggtacttcgccgaagtggtggtggacctcgaccagatcgtggagccgatgatcgcggac
ccggatgtgcacaacgccgatgtctcgaaacgctacacccacgacacgatccggccgatt
tcctattacggcgcggagaagaagatcgacctcggcttcgtgggctcctgcatggtgcac
aagggcgacgtgaagatcgtggcccagatgctgcgcaatctcgaaaaggccaatggcgag
gtcaagttcaaggcgccgctggtgctcgccgcgccgacctacaacatcatcgacgagttg
aaggaagagggcgactgggacgtgctgcagaaatacgcgggcttcgagttcgacgattcc
gcgccgaaggaaaaggcgcgcacggaatacgagaatatcctctatctcgaacgtccgggc
tgcaacctgtgcatgggcaaccaggagaaggcggccaagggtgacactgtcctggcaacc
tccacccggctgttccagggccgcgtggtggccgacagcgaaaccaagaagggcgagtcc
ctgctcggctcgaccccggtcgtggtgctctcggcgatcctcgggcgcaccccgacggtc
gaggagtacaagacagcggtcgaagggatcaacctgaccaagttcgccccgcccctgacc
ccaccgatcgacgccaagtcggtccacttctag
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