Dinoroseobacter shibae: Dshi_2110
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Entry
Dshi_2110 CDS
T00612
Name
(GenBank) indigoidine synthase A-like protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00240
Pyrimidine metabolism
dsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Dshi_2110
Enzymes [BR:
dsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
Dshi_2110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
ABV93847
RoseoBase:
Dshi_2110
UniProt:
A8LQI0
LinkDB
All DBs
Position
2238185..2239102
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AA seq
305 aa
AA seq
DB search
MTHLPSFVDVHADVRNALETNAPVVALESTIITHGMPFPDNVEMAKAVEEEIRARGAIPA
TIAVLDGVLKIGLGADELEALAKVKDALKISRADIGYAISQGKSAGTTVAATMIVAQMAG
IRVFATGGIGGVHKGVETSFDISADLTELGRTDVIVVAAGAKAILDVPKTLEVLETQGVS
VVGYRTDTLPAFWTSGSDLDIPLRLDSAAEISEFQKVRDALRLGGGMLVANPIPAGDEIP
AEIINGYIATAQAEMAAQSISGKAVTPFLLQRIFELSEGRSLRSNIALVKNNARLAADIA
VALHS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacccacctgcccagctttgtcgacgtccatgcggatgttcggaacgccctggaaacc
aacgcccccgtcgtcgcgctggaaagcacgatcatcacccatggcatgccgttccccgac
aacgtggagatggccaaggccgtggaggaggagatccgcgcccgcggtgcaattccggcc
accatcgcggtgctggatggcgtgctgaagatcggcctgggcgcggatgagctggaggcg
ctggcgaaggtgaaggatgcgctgaagatctcgcgggccgatatcggctatgcgatctcc
caggggaaatcggccggcaccaccgtggccgcgaccatgatcgtggcgcagatggccggc
atccgggtgttcgcgaccggcgggatcgggggggtgcacaagggggtcgagacgagcttc
gacatctcggcggacctgaccgagttgggccggaccgatgtcatcgtcgtcgccgcgggc
gcgaaagcgatcctcgatgtgccgaagaccctcgaagttctcgaaacccagggcgtgtcg
gtggtcggctatcgcaccgacacgctgccggccttctggaccagcgggtcggacctggac
atcccgttgcggctggacagcgcggcggagatttccgagttccaaaaggtgcgcgatgcg
ctgcggctcgggggcgggatgctggtggccaatccgatcccggcgggcgacgagatcccg
gcggagatcatcaacggctacatcgccacggcccaggcggagatggcggctcagagcatc
tcgggcaaggccgtgacacccttcctgctgcagcggattttcgagttgtcggaggggcgg
agcctgcggtccaacatcgcgctggtcaagaacaacgccaggctggcggcggatatcgcc
gtggccttgcactcctag
DBGET
integrated database retrieval system
