Dinoroseobacter shibae: Dshi_2206
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Entry
Dshi_2206 CDS
T00612
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Dshi_2206 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dsh01007
]
Dshi_2206 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsh03016
]
Dshi_2206 (lysS)
Enzymes [BR:
dsh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Dshi_2206 (lysS)
Amino acid related enzymes [BR:
dsh01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Dshi_2206 (lysS)
Transfer RNA biogenesis [BR:
dsh03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Dshi_2206 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ABV93942
RoseoBase:
Dshi_2206
UniProt:
A8LR19
LinkDB
All DBs
Position
2331348..2333006
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AA seq
552 aa
AA seq
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MTESLREIAMASKAWPFEEARRVLKRYAKGAPEKGHVLFQTGYGPSGLPHIGTFGEVART
TMVRRAFELLSDIPTKLICFSDDMDGFRKVPGNVPMQEELRADLNLPLTKVRDPFGTHAG
FAQHNNARLCEFLDSFGFEYEFASATEYYTSGKFDEMLLVALERFDEIQKIMLPTLGADR
QATYSCFLPISPKTGHVLQVPTLERNVAKGTIVYEEPDGERVEIPVTGGNVKMQWKPDWA
MRWAALGVDYEMSGKDLIDSVTQSSKICRALGKRPPESLSYELFNDENGQKISKSKGNGL
SMEEWLTYAAPESLQYFMYLKPKTAKRLYFDVIPKAVDEYHQQLRAYPGQDAKGQLNNPV
FHIHGADVPGSDMVVSFAMLLNLASVSGAENKDALWGFIRKYAPEATAETHPGLDAAAGF
AVRYFNDRIKPTRRFRAPSDQERAAMADLAKALRDPGLGADMIARKNAAAGQESAVTTLD
YGSDEDLQSVCFAIGKLHGFANLRDWFKALYEVLLGASEGPRFGGFAALYGPEATADLID
RALAGELIGDAA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagagtttgcgcgagattgcgatggcgtcgaaggcctggccgttcgaagaggcg
cgccgggtgctcaaacgctatgccaagggcgcgccggagaagggccatgtgctgttccag
accgggtacggaccgagcgggttgccgcatatcggcaccttcggggaggtggcgcgcacg
accatggtgcgccgcgccttcgaattgctgagcgacattcccaccaagctgatctgtttt
tccgatgacatggacgggtttcgcaaggtgcccggcaacgtgcccatgcaggaggagttg
cgcgcggacctgaacctgccgctgacgaaggtgcgcgacccgttcggcacccatgcgggg
ttcgcccagcacaacaatgcgcggttgtgcgagttcctcgacagtttcgggttcgagtac
gagttcgcgagtgcgacggagtattacacctccggcaagttcgacgagatgttgctggtg
gcgctggagcggttcgacgagatccagaagatcatgctgccgaccctgggcgcggaccgg
caggcgacctattcgtgtttcctgccgatcagccccaagacgggccacgtattgcaggtc
ccgaccctggagcggaacgtcgcgaagggaaccatcgtctatgaggagccggatggcgag
cgggtggaaatcccggtcacgggcggcaacgtcaagatgcagtggaagcccgactgggcc
atgcgctgggccgcgctcggcgtggattacgagatgtcgggcaaggatttgatcgacagc
gtgacccagtcgagcaagatctgtcgcgcgcttggcaagcggccgcccgagagcctgtct
tacgagttgttcaacgatgagaacgggcagaagatttccaagtccaagggcaacgggctg
agcatggaggagtggctgacctatgccgcgccggaatccctgcaatatttcatgtatctc
aagcccaagaccgccaagcggctctatttcgacgtgatccccaaggcggtggacgagtat
caccagcagttgcgcgcctatccgggccaggacgccaaggggcagctgaacaacccggtg
ttccatatccacggggcggatgtgcccggctcggacatggtggtgtcgttcgcgatgctg
ctgaacttggcgtcggtgtcgggtgcggagaacaaggatgcgctctgggggttcatccgg
aagtacgcccccgaggccaccgccgagacccatccgggtctggacgcggcggcgggtttc
gcggtgcggtatttcaacgatcggatcaagccgacgcgccgcttccgcgcgcccagcgac
caggagcgggcggcgatggcggatctggccaaggccctgcgcgaccccggtctcggcgcc
gatatgatcgcgcgcaagaacgcggcggcaggccaggagagtgcggtcaccacgctggat
tacgggtcggacgaggacctgcaatcggtgtgtttcgccatcggcaagctgcacgggttc
gccaatctgcgcgactggttcaaggcgctttacgaggtgctgctgggcgcgtccgagggc
ccgcgctttggcgggttcgcggcgctttacggccccgaggccacggcggatctgatcgac
cgggcgctggccggggagctgatcggggacgccgcctga
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