Dinoroseobacter shibae: Dshi_2311 Help Entry Dshi_2311         CDS       T00612                                  Symbol putA Name (GenBank) bifunctional protein   KO K13821   RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] Organism dsh  Dinoroseobacter shibae Pathway dsh00250   Alanine, aspartate and glutamate metabolism dsh00330   Arginine and proline metabolism dsh01100   Metabolic pathways dsh01110   Biosynthesis of secondary metabolites Module dsh_M00970   Proline degradation, proline => glutamate Brite KEGG Orthology (KO) [BR:dsh00001]  09100 Metabolism   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     Dshi_2311 (putA)    00330 Arginine and proline metabolism     Dshi_2311 (putA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:dsh03000]     Dshi_2311 (putA) Enzymes [BR:dsh01000]  1. Oxidoreductases   1.2  Acting on the aldehyde or oxo group of donors    1.2.1  With NAD+ or NADP+ as acceptor     1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase      Dshi_2311 (putA)   1.5  Acting on the CH-NH group of donors    1.5.5  With a quinone or similar compound as acceptor     1.5.5.2  proline dehydrogenase      Dshi_2311 (putA) Transcription factors [BR:dsh03000]  Prokaryotic type   Ribbon-helix-helix    Other families     Dshi_2311 (putA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Aldedh Pro_dh Pro_dh-DNA_bdg PRODH Motif Other DBs NCBI-ProteinID:  ABV94047 RoseoBase:  Dshi_2311 UniProt:  A8LRL6 LinkDB All DBs Position 2439747..2443412 Genome browser AA seq 1221 aa AA seqDB search MNRAFDISSQIDNPFRAQVRAHYTAEETALLKSLAARIKLSAHEREKAAAAGARYVTRVR NETRPSMMEAFLAEYGLSTSEGVGLMCLAEALLRVPDADTIDDLIEDKVAPSNWGAHLGH SSSSLVNASTWALMLTGKVLDEDPRGPARALRGLVKRLGEPVVRTAVGQSMKVLGRQFVL GQTIEEGLKNARELEKKGFTYSYDMLGEAARTDADARRYHAAYAQAITAIARQATGDVRS SPGISVKLSALHPRYEYTHRHSVMADLVPRAAALVKQAAQAGIGFNVDAEEQDRLDLSLD VIEAMMSDPDLDGWDGFGVVVQAYGRRAGPVIETLYDMAERYDRKIMVRLVKGAYWDTEI KLAQELGVERFPVFTRKNNTDVSYMACAQMLLDRRDRIYPQFATHNAHTCAAVLQMAGNA RDCFEFQRLHGMGASLHQIVKETEGTRCRIYAPVGAHQDLLAYLVRRLLENGANSSFVNQ IVDPDIPAEAISADPVSEMEKLGDQIPNPAIRQPSDLFAPDRRNSRGYRVNEPASILPLM TAREAFAETTWHARPMLAGGRDPTGPTREVHSPADKTRLVGTVQEASAEDVACALDAAET GFRDWSARPVSERADMLRKLADMYEDNIAELTAITTREAGKTVLDGIAEVREAVDFLRFY ANEAERLEEEDPGRPRGIFVCISPWNFPLAIFTGQIAAALVMGNAVLAKPAEQTPIIAAR AVQMMRDCGLPDAALQLLPGDGPMVGGPLTSDPRIAGVCFTGSTEVAMIIHKALAKNAGP EAVLVAETGGLNAMIVDSTALHEQAVRDILISSFQSAGQRCSALRILYVQEDVHDKLMEM LSGALDALVIGDSWNLDVDVSPVIDADAQSDILGYIDQHRKAGTLIKTLAAPDSGTYVTP AIVKVGGIADMEREIFGPVLHVATFKANEIDQVVDAINARRYGLTFGLHTRIDDRVEQIV ERIQVGNVYVNRNQIGAIVGSQPFGGEGLSGTGPKAGGPLYLTRFRKVGKSTSHPAPQGA VLGKAALNTALSSLDARNWAARPDRVHILRMALSGSTGVVRRALSETAAFDMSPQTLPGP TGESNRLSMVPRGTVLCLGPTPEIAMAQAVQALGAGCAVVIALPGSTPLSQPLSDAGAPV VTLDGTVDCVTLTELTGIEVVAAAGASDWTRTLRVALSQRDGPIIPLIVDEIAPERYVLE RHLCIDTTAAGGNAKLLAASS NT seq 3666 nt NT seq  +upstreamnt  +downstreamnt atgaacagggcgttcgacatatccagtcagatcgacaatccgtttcgcgcccaggtgcgc gcgcattacaccgccgaggaaaccgcgcttctgaaatctctggccgcccgcatcaaactg tcggcacacgaacgcgagaaggccgccgctgccggggcccgatacgtgacaagggtcaga aacgagaccaggccctctatgatggaggcgtttctggccgaatatggtctctcgacatcc gaaggcgtgggcctgatgtgcctcgccgaagcgttgctgcgcgtcccggatgcggacacc attgatgatctgatcgaggacaaggttgcgccatcgaactggggcgcgcatctgggccat tcctcgtcttctttggtgaatgcatcgacctgggcgctgatgttgaccggcaaggttctg gatgaagaccccagggggccggcgcgcgccctgcgcgggctggtcaagcgcctgggcgag ccggtcgtgcgcaccgctgtcggccaatcgatgaaggtgctgggacgacaattcgttcta ggtcagaccattgaggaaggcctgaagaacgcccgcgagttggaaaaaaaggggttcacc tattcctacgacatgcttggcgaagcggcccgcaccgacgccgatgccaggcgctatcat gccgcctatgcccaggcaatcacggcaattgccaggcaggccacgggggatgttcgctcc tcgcccggcatctcggtcaagttgtcggccctgcacccacgctacgaatacacccaccga cattcggtgatggcagacttggtgccccgcgcggcggcactggtaaaacaagccgcccag gccggtatcggcttcaatgtcgacgcagaggaacaggaccggctcgatctctcgctcgat gtgatcgaagcgatgatgtcagacccggatctcgacgggtgggacgggttcggcgttgtc gtgcaagcctatggccgccgtgccgggcccgtcatcgagaccctgtatgacatggcagag cggtatgatcggaagatcatggtgcggctcgtcaagggcgcctactgggacaccgagatc aaactggcgcaggaattgggggtggaacggtttccggtctttacccgcaagaacaatacc gatgtgagctatatggcctgtgcacaaatgctgctggaccggcgcgaccgaatctatccg cagtttgccacccacaacgcccatacctgtgccgccgtcttgcagatggccggcaacgcc agagactgcttcgaattccagcgcctgcatggaatgggcgcgtcgctgcatcagatcgtc aaggagaccgaaggcacccggtgccggatctatgcgccggtcggcgcgcatcaggatctt ctggcctatctcgtccgccgccttctcgaaaacggggccaactcatcctttgtgaaccag atcgtcgatcccgacatccccgccgaggcgatctccgccgatccggtatccgagatggag aagctgggcgatcagatcccgaacccggcgatccggcaaccatccgacctctttgccccc gaccggcgcaactccagaggctaccgcgtcaacgaaccggcatcgatcctcccgctgatg actgcgcgcgaagccttcgccgagaccacctggcatgcacgaccgatgctggccgggggc cgtgacccgaccgggcccacgcgcgaggtgcattcgcccgcggacaagacccgccttgtc ggcaccgttcaggaggcctccgccgaggatgtcgcctgcgcgctcgatgccgccgaaacc ggcttcagagactggtcggcccggcccgtgtccgagcgcgccgatatgttgcgcaaactg gccgacatgtacgaagacaacatcgccgaactcaccgcgatcaccacgcgcgaggccgga aagaccgtcctcgacggcattgccgaagtgcgcgaagcagttgatttcctgcgcttctat gcgaacgaggccgaacgtctggaagaagaggatccgggccgtccgcgcggtatcttcgtc tgcatcagtccttggaacttcccgctggccatcttcaccggccagatcgcggcggctctc gtcatgggcaacgcggtgctggccaaaccggccgaacagacgccgatcatcgccgctcgc gcggtgcagatgatgcgcgactgcggcctgcccgacgccgccctccagcttttgcccggc gacggtccaatggttggcggtccgctgaccagcgatccgcgcattgccggggtctgtttc acaggctccaccgaagtggcgatgatcatccacaaggcactggcgaagaacgccggacca gaggcggttctggtcgccgaaaccggtggtctgaacgcgatgatcgtcgattccaccgcc ctgcacgaacaggccgtgcgcgatatcctgatctcttcgttccagtcggctggccagcgc tgttccgccctgcgcattctctacgttcaggaagacgtgcatgacaagctgatggagatg ctgtcgggcgcgctcgatgcgctggtgatcggcgacagctggaacctggatgtcgatgtg tcccccgtgatcgatgccgacgcccagagcgatatcctgggctatatcgaccagcaccgg aaagcgggcaccctgatcaagacgctcgccgcacccgacagcggtacctatgtcaccccg gccatcgtcaaggtgggcggcatcgcggacatggaacgcgaaatcttcggccccgttctg catgtcgcgaccttcaaggcgaacgagatcgaccaggtggtggacgccatcaatgcgcgc cgctacggcctgactttcggccttcacacgcggatcgacgaccgggtcgaacagatcgtc gaacgaatccaggtcggcaatgtctacgtcaaccgcaaccagatcggcgccatcgtgggc agtcagccctttggcggcgaagggctttcgggaaccggtccgaaggcgggagggccgctt tacctgacccgcttccgcaaggtcggaaagtccaccagccatcccgccccgcaaggggct gtgctcggcaaagcggcactgaacacggccctgtcgtcgctcgatgcgcgaaactgggcc gcacggccggaccgggtgcacatcttgcgcatggcgctcagtggcagtaccggcgtggtg cgccgcgccttgtcggaaacggcggccttcgacatgtccccgcagacgctgccggggccg accggcgagagtaaccgcctgagcatggtcccgcgcggcacggtcctgtgcctcggcccc accccggaaatcgcgatggcccaggcggtgcaggcacttggcgcaggatgcgcggtggtg attgccctgcccggcagcacgcccctgtcccaaccgctctccgacgcgggcgcccctgtc gtgaccctcgacggcacggtcgactgtgtaaccctgacagagctcacaggcatagaggtc gtcgccgctgccggcgcttcggattggacgcgcaccctgcgggtcgccttgtcccaacgc gacggaccaatcatcccgctgatcgtcgacgaaatcgcgcccgagcggtacgtgctcgaa cgccacctgtgcatcgacacgacggcggcaggcggcaatgccaaattgctggccgcctcg tcgtga

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